RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BPIFB1Q8TDL5 484 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 WHAMMQ8TF30 809 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 ZFYVE19Q96K21 471 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 SLC22A12Q96S37 553 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 PHOX2BQ99453 314 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 NIF3L1Q9GZT8 377 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CYP3A43Q9HB55 503 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 GCNT4Q9P109 453 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 CACNA1IQ9P0X4 2223 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 MYO15AQ9UKN7 3530 aa20.15■□□□□ 0.82
CKS1B-203ENST00000368439 BIN1O00499 593 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 STX10O60499 249 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 TARSP26639 723 aaKnown RBP20.14■□□□□ 0.81
CKS1B-203ENST00000368439 AVPR1AP37288 418 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 MLLT6P55198 1093 aaPredicted RBP20.14■□□□□ 0.81
CKS1B-203ENST00000368439 STIM1Q13586 685 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 ZNF268Q14587 947 aaPredicted RBP20.14■□□□□ 0.81
CKS1B-203ENST00000368439 ARHGAP29Q52LW3 1261 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 YAF2Q8IY57 180 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 FBXL13Q8NEE6 735 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 SLC35C1Q96A29 364 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 CYP2S1Q96SQ9 504 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 KCNK16Q96T55 309 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 IMPG2Q9BZV3 1241 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 TDP1Q9NUW8 608 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 RAB20Q9NX57 234 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 COQ4Q9Y3A0 265 aa20.14■□□□□ 0.81
CKS1B-203ENST00000368439 DMDP11532 3685 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 FAM170BA6NMN3 283 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 TNFRSF10BO14763 440 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 CILPO75339 1184 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 UBXN2BQ14CS0 331 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 ZNF852Q6ZMS4 543 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 FILIP1Q7Z7B0 1213 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 C12orf29Q8N999 325 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 ZMIZ2Q8NF64 920 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 NELFBQ8WX92 580 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 CLDN23Q96B33 292 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 FAXDC2Q96IV6 333 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 CEP63Q96MT8 703 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 PIAS3Q9Y6X2 628 aa20.13■□□□□ 0.81
CKS1B-203ENST00000368439 BEST1O76090 585 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 CCDC130P13994 396 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
CKS1B-203ENST00000368439 ANGPT1Q15389 498 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 DCAF17Q5H9S7 520 aaPredicted RBP20.12■□□□□ 0.81
CKS1B-203ENST00000368439 KLHL10Q6JEL2 608 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 CLEC17AQ6ZS10 378 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 FRMD5Q7Z6J6 570 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 SLC2A14Q8TDB8 520 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 SMARCD1Q96GM5 515 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 NELL2Q99435 816 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 SMOQ99835 787 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 FAM83CQ9BQN1 747 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 MED10Q9BTT4 135 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 IRF2BPLQ9H1B7 796 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 KIF9Q9HAQ2 790 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 CSNK1G1Q9HCP0 422 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 FAM86C1Q9NVL1 165 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 GTSE1Q9NYZ3 720 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 IL37Q9NZH6 218 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 EHD2Q9NZN4 543 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 KIAA1468Q9P260 1216 aa20.12■□□□□ 0.81
CKS1B-203ENST00000368439 ARMCX3Q9UH62 379 aaPredicted RBP20.12■□□□□ 0.81
CKS1B-203ENST00000368439 PIEZO1Q92508 2521 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 ATP8B3O60423 1300 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 ZNF840PA6NDX5 716 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 MAN2B1O00754 1011 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TNK2Q07912 1038 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 CAMK4Q16566 473 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TCERG1LQ5VWI1 586 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 NUP93Q8N1F7 819 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 ARL14EPQ8N8R7 260 aaPredicted RBP20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TRIML1Q8N9V2 468 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TATDN2Q93075 761 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 NT5C1AQ9BXI3 368 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TRPC7Q9HCX4 862 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 DMAP1Q9NPF5 467 aaPredicted RBP20.11■□□□□ 0.81
CKS1B-203ENST00000368439 FAM49BQ9NUQ9 324 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 CTNND2Q9UQB3 1225 aa20.11■□□□□ 0.81
CKS1B-203ENST00000368439 TRAV19A0A0A6YYK7 116 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 AP1G2O75843 785 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 OLFM2O95897 454 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 USP17L7P0C7H9 530 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 TCF3P15923 654 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 CD58P19256 250 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 SOX9P48436 509 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 PPP3CCP48454 512 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 ZXDBP98169 803 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 TAF10Q12962 218 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 USP4Q13107 963 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 ZNF77Q15935 545 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 CCDC150Q8NCX0 1101 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 SCAMP5Q8TAC9 235 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 CSGALNACT1Q8TDX6 532 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 FAM3CQ92520 227 aa20.1■□□□□ 0.81
CKS1B-203ENST00000368439 ATOH1Q92858 354 aaPredicted RBP20.1■□□□□ 0.81
CKS1B-203ENST00000368439 HNRNPABQ99729 332 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms