RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 TRPC7Q9HCX4 862 aa25.41■■□□□ 1.66
PFDN2-201ENST00000368010 DMAP1Q9NPF5 467 aaPredicted RBP25.41■■□□□ 1.66
PFDN2-201ENST00000368010 KRT82Q9NSB4 513 aa25.41■■□□□ 1.66
PFDN2-201ENST00000368010 COQ4Q9Y3A0 265 aa25.41■■□□□ 1.66
PFDN2-201ENST00000368010 SIT1Q9Y3P8 196 aa25.41■■□□□ 1.66
PFDN2-201ENST00000368010 MUC6Q6W4X9 2439 aa25.41■■□□□ 1.66
PFDN2-201ENST00000368010 KANSL1LA0AUZ9 987 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 GALR2O43603 387 aaPredicted RBP25.4■■□□□ 1.66
PFDN2-201ENST00000368010 CILPO75339 1184 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 CCDC130P13994 396 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 ARHGAP29Q52LW3 1261 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 TTC39CQ8N584 583 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 PJA1Q8NG27 643 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 SLC2A14Q8TDB8 520 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 LRRC3BQ96PB8 259 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 TWNKQ96RR1 684 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 FAM49BQ9NUQ9 324 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 TRPM5Q9NZQ8 1165 aa25.4■■□□□ 1.66
PFDN2-201ENST00000368010 TRAV19A0A0A6YYK7 116 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 AP1G2O75843 785 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 GNA14O95837 355 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 PLA2G5P39877 138 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 CCDC105Q8IYK2 499 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 NUP93Q8N1F7 819 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 C12orf29Q8N999 325 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 CSGALNACT1Q8TDX6 532 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 USP13Q92995 863 aaPredicted RBP25.39■■□□□ 1.66
PFDN2-201ENST00000368010 GBP4Q96PP9 640 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 KCNK16Q96T55 309 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 TDP1Q9NUW8 608 aa25.39■■□□□ 1.66
PFDN2-201ENST00000368010 THG1LQ9NWX6 298 aaKnown RBP25.39■■□□□ 1.66
PFDN2-201ENST00000368010 ARNTLO00327 626 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 RTN3O95197 1032 aaPredicted RBP25.38■■□□□ 1.65
PFDN2-201ENST00000368010 CKMP06732 381 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 PPP3CCP48454 512 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 FMO5P49326 533 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 PLCB2Q00722 1185 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 TCF15Q12870 199 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 UBXN2BQ14CS0 331 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 ZNF852Q6ZMS4 543 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 WHAMMQ8TF30 809 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 SLITRK1Q96PX8 696 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 FAM124BQ9H5Z6 455 aaPredicted RBP25.38■■□□□ 1.65
PFDN2-201ENST00000368010 LTB4R2Q9NPC1 389 aa25.38■■□□□ 1.65
PFDN2-201ENST00000368010 MRPS17Q9Y2R5 130 aaKnown RBP25.38■■□□□ 1.65
PFDN2-201ENST00000368010 OBSL1O75147 1896 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 MAN2B1O00754 1011 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 FGFR1OPO95684 399 aaKnown RBP25.37■■□□□ 1.65
PFDN2-201ENST00000368010 USP17L7P0C7H9 530 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 CD72P21854 359 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 PDE6CP51160 858 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 IFRD2Q12894 506 aaPredicted RBP25.37■■□□□ 1.65
PFDN2-201ENST00000368010 ZNF268Q14587 947 aaPredicted RBP25.37■■□□□ 1.65
PFDN2-201ENST00000368010 DTWD2Q8NBA8 298 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 TATDN2Q93075 761 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 IPO9Q96P70 1041 aaKnown RBP25.37■■□□□ 1.65
PFDN2-201ENST00000368010 NELL2Q99435 816 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 SRRTQ9BXP5 876 aaKnown RBP25.37■■□□□ 1.65
PFDN2-201ENST00000368010 NUP62CLQ9H1M0 184 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 CISHQ9NSE2 258 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 RWDD2AQ9UIY3 292 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 CCL26Q9Y258 94 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 PIAS3Q9Y6X2 628 aa25.37■■□□□ 1.65
PFDN2-201ENST00000368010 COL4A3Q01955 1670 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 DCNP07585 359 aaKnown RBP25.36■■□□□ 1.65
PFDN2-201ENST00000368010 FAM200BP0CF97 657 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 PFKLP17858 780 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 YWHAQP27348 245 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 ADORA2BP29275 332 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 TAF10Q12962 218 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 ZNF394Q53GI3 561 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 MLKLQ8NB16 471 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 CYFIP2Q96F07 1278 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 ZFYVE19Q96K21 471 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 HNRNPABQ99729 332 aaKnown RBP25.36■■□□□ 1.65
PFDN2-201ENST00000368010 ARID3AQ99856 593 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 OSBPL6Q9BZF3 934 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 IRF2BPLQ9H1B7 796 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 CSNK1G1Q9HCP0 422 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 LMBRD1Q9NUN5 540 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 GCNT4Q9P109 453 aa25.36■■□□□ 1.65
PFDN2-201ENST00000368010 DENND4CQ5VZ89 1909 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 COL4A2P08572 1712 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 C2orf78A6NCI8 922 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 ZNF840PA6NDX5 716 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 FAM170BA6NMN3 283 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 GLULP15104 373 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 HDCP19113 662 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 SLC5A3P53794 718 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 MARSP56192 900 aaKnown RBP25.35■■□□□ 1.65
PFDN2-201ENST00000368010 NHLH1Q02575 133 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 CETN1Q12798 172 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 CUL2Q13617 745 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 TRIM59Q8IWR1 403 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 ARL14EPQ8N8R7 260 aaPredicted RBP25.35■■□□□ 1.65
PFDN2-201ENST00000368010 PDZD8Q8NEN9 1154 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 FBXO32Q969P5 355 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 MSANTD3Q96H12 275 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 SLC22A12Q96S37 553 aa25.35■■□□□ 1.65
PFDN2-201ENST00000368010 CYP2S1Q96SQ9 504 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms