RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 TSPY1Q01534 308 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 STX5Q13190 355 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 GADL1Q6ZQY3 521 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SEZ6LQ9BYH1 1024 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 POLIQ9UNA4 740 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ASTN2O75129 1339 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 KCNQ2O43526 872 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 CREB3O43889 395 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SGPL1O95470 568 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 CDH6P55285 790 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZBTB17Q13105 803 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZNF211Q13398 564 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RHPN2Q8IUC4 686 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 FUKQ8N0W3 1084 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 GDAP1Q8TB36 358 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 C1orf54Q8WWF1 131 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ACSS3Q9H6R3 686 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 DNAJC18Q9H819 358 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 LRRC40Q9H9A6 602 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 THAP1Q9NVV9 213 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 BARX2Q9UMQ3 279 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 C15orf41Q9Y2V0 281 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 MYH1P12882 1939 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 GOLGA8IPA6NC78 632 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 SDR42E2A6NKP2 422 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 KLHL41O60662 606 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 UNC5CO95185 931 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 CYP1A1P04798 512 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 TPD52P55327 224 aaPredicted RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZACNQ401N2 412 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 DPH6Q7L8W6 267 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ANKS1BQ7Z6G8 1248 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RIOX2Q8IUF8 465 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 TMEM86AQ8N2M4 240 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 AADATQ8N5Z0 425 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 ZBTB18Q99592 522 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 BTBD10Q9BSF8 475 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 NFKBIZQ9BYH8 718 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 RETREG1Q9H6L5 497 aa7.6□□□□□ -1.19
VTA1-202ENST00000367630 PPARGC1AQ9UBK2 798 aaKnown RBP7.6□□□□□ -1.19
VTA1-202ENST00000367630 PDE2AO00408 941 aaPredicted RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 LIASO43766 372 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 CSDE1O75534 798 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 GJB6O95452 261 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 WASHC5Q12768 1159 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 AUHQ13825 339 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 VSIG10LQ86VR7 867 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 LONP2Q86WA8 852 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.59□□□□□ -1.19
VTA1-202ENST00000367630 TMEM161BQ8NDZ6 487 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 FBXO25Q8TCJ0 367 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 TFB1MQ8WVM0 346 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 CFAP36Q96G28 342 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SCYL1Q96KG9 808 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 NRDE2Q9H7Z3 1164 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 GOLGA8SH3BPF8 625 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 KLF11O14901 512 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 CAND2O75155 1236 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 COL6A2P12110 1019 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 RAD23BP54727 409 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 RPS6KA2Q15349 733 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 HSFY1Q96LI6 401 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 LNPEPQ9UIQ6 1025 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SF3B1O75533 1304 aaKnown RBP eCLIP7.59□□□□□ -1.197e-7■■■■■ 119.6
VTA1-202ENST00000367630 MROH7Q68CQ1 1323 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 TGFB1I1O43294 461 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 DTNBO60941 627 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 GFAPP14136 432 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 KLRK1P26718 216 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SLCO1A2P46721 670 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 GYS2P54840 703 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 DSG1Q02413 1049 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 MMEL1Q495T6 779 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 C1orf146Q5VVC0 180 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 ECM29Q5VYK3 1845 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SEPT14Q6ZU15 432 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SV2AQ7L0J3 742 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 PIGWQ7Z7B1 504 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 UROC1Q96N76 676 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 SLITRK1Q96PX8 696 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 MKS1Q9NXB0 559 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 MAFO75444 373 aaPredicted RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 CTCFP49711 727 aaPredicted RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 BST2Q10589 180 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 PPP2R5DQ14738 602 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 STON2Q8WXE9 905 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 PPP2R3CQ969Q6 453 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 C7orf26Q96N11 449 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 GID8Q9NWU2 228 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 ZNF219Q9P2Y4 722 aaPredicted RBP7.59□□□□□ -1.19
VTA1-202ENST00000367630 KIF13BQ9NQT8 1826 aa7.59□□□□□ -1.19
VTA1-202ENST00000367630 COL16A1Q07092 1604 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms