RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 TLR2O60603 784 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 GLRA3O75311 464 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 FSBPO95073 299 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 SOX11P35716 441 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 GRAMD4Q6IC98 578 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 NAPEPLDQ6IQ20 393 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 C16orf87Q6PH81 154 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 HSD3B7Q9H2F3 369 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 PSMD3O43242 534 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 CPB1P15086 417 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 CALB2P22676 271 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 MARCKSL1P49006 195 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
RD3-201ENST00000367002 FLOT2Q14254 428 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 PDK2Q15119 407 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 PGM5Q15124 567 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 PCYOX1LQ8NBM8 494 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 LNX1Q8TBB1 728 aaPredicted RBP11.91□□□□□ -0.5
RD3-201ENST00000367002 CCDC134Q9H6E4 229 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 NDFIP2Q9NV92 336 aa11.91□□□□□ -0.5
RD3-201ENST00000367002 ASTN1O14525 1302 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ANKRD63C9JTQ0 380 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 PMPCBO75439 489 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 TNFRSF8P28908 595 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 NUDT2P50583 147 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 WDR49Q8IV35 697 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 SAMD3Q8N6K7 520 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 TEKT4Q8WW24 435 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ZBTB45Q96K62 511 aaPredicted RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 KLK14Q9P0G3 267 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 PDE4DIPQ5VU43 2346 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 FGRP09769 529 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ACO1P21399 889 aaKnown RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 PCSK1P29120 753 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 FDFT1P37268 417 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 RAP1GAPP47736 663 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 INPP1P49441 399 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 TSPAN17Q96FV3 270 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 TMEM120AQ9BXJ8 343 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 KCTD10Q9H3F6 313 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 OLA1Q9NTK5 396 aaKnown RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 CTNNAL1Q9UBT7 734 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 DNAJC16Q9Y2G8 782 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 GAKO14976 1311 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 SNX3O60493 162 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 CYP3A4P08684 503 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 FAM200BP0CF97 657 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 RECQLP46063 649 aaPredicted RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 INPP5AQ14642 412 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 SPATA2LQ8IUW3 424 aaPredicted RBP11.9□□□□□ -0.5
RD3-201ENST00000367002 SLC25A41Q8N5S1 370 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ZSWIM2Q8NEG5 633 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 MKL1Q969V6 931 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 ASIC4Q96FT7 647 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 APOL2Q9BQE5 337 aa11.9□□□□□ -0.5
RD3-201ENST00000367002 TM9SF1O15321 606 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 PSMD10O75832 226 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 ZSCAN5DPP0CG00 497 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 CXCL8P10145 99 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 TAF6P49848 677 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 LAMC2Q13753 1193 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 NFIL3Q16649 462 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 MAP4K3Q8IVH8 894 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 SNX19Q92543 992 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 TMEM176AQ96HP8 235 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 TMEM237Q96Q45 408 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 TCHHQ07283 1943 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 F8VP50 259 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 BTKQ06187 659 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 CXCL9Q07325 125 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 AUHQ13825 339 aaKnown RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 ANO4Q32M45 955 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 SV2CQ496J9 727 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
RD3-201ENST00000367002 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 CCNJLQ8IV13 435 aa11.89□□□□□ -0.51
RD3-201ENST00000367002 UBQLN1Q9UMX0 589 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms