RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 TRPC3Q13507 836 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 PSMD6Q15008 389 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 EML3Q32P44 896 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 WDR72Q3MJ13 1102 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 MDH1BQ5I0G3 518 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 PPM1JQ5JR12 505 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 FOXD4L5Q5VV16 416 aaPredicted RBP8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 NAIF1Q69YI7 327 aaPredicted RBP8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 IL31Q6EBC2 164 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 CNNM4Q6P4Q7 775 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 DENND5BQ6ZUT9 1274 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 EPM2AIP1Q7L775 607 aaPredicted RBP8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 LIMS2Q7Z4I7 341 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 KBTBD6Q86V97 674 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 CAMKK1Q8N5S9 505 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 XXYLT1Q8NBI6 393 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 OR6B3Q8NGW1 331 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 CCDC26Q8TAB7 109 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 MYCBPAPQ8TBZ2 947 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 ZNF507Q8TCN5 953 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 FOXD4L4Q8WXT5 416 aaPredicted RBP8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 PCED1BQ96HM7 432 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 LOXL4Q96JB6 756 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 ARRDC1-AS1Q9H2J1 176 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 FBRSL1Q9HCM7 1045 aaKnown RBP8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 GCNT4Q9P109 453 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 ARHGAP26Q9UNA1 814 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 SPTBN2O15020 2390 aa8.73□□□□□ -1.01
RNU4-59P-201ENST00000364447 DNAH14Q0VDD8 3507 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 MYH10P35580 1976 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SDK1Q7Z5N4 2213 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 F8VP50 259 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 POLR2DO15514 142 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 TGFB1I1O43294 461 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 GDF9O60383 454 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 TACC1O75410 805 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 AKAP3O75969 853 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 EPN2O95208 641 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 APBB3O95704 486 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 TCF3P15923 654 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 PFKLP17858 780 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 PTPN1P18031 435 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 ME1P48163 572 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 PPP3CCP48454 512 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 USP46P62068 366 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SNRPFP62306 86 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 NOP14P78316 857 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 IFRD2Q12894 506 aaPredicted RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 DMC1Q14565 340 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SF3A2Q15428 464 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 ELF2Q15723 593 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 CCDC6Q16204 474 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 UNC13DQ70J99 1090 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SYT13Q7L8C5 426 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 DDX1Q92499 740 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SYAP1Q96A49 352 aaPredicted RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 C8orf48Q96LL4 319 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 C7orf25Q9BPX7 421 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 MRPL45Q9BRJ2 306 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 TTLL2Q9BWV7 592 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 ELOVL4Q9GZR5 314 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 POLR3BQ9NW08 1133 aaPredicted RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 CGNQ9P2M7 1197 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 NXF1Q9UBU9 619 aaKnown RBP8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 ATP8B3O60423 1300 aa8.72□□□□□ -1.01
RNU4-59P-201ENST00000364447 A8MXQ7 604 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 LEFTY2O00292 366 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 SLC9A3R1O14745 358 aaPredicted RBP8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 EXOC3O60645 756 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 ZNF806P0C7X5 589 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 CASP1P29466 404 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 ATICP31939 592 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 GBP1P32455 592 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 MPLP40238 635 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 AFMP43652 599 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 RAP1GAPP47736 663 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 DGKEP52429 567 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 SEC13P55735 322 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 MYL6P60660 151 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 BIRC3Q13489 604 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 ZNF699Q32M78 642 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 HSCBQ8IWL3 235 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 CEP57L1Q8IYX8 460 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 B3GALNT2Q8NCR0 500 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 TSTD1Q8NFU3 115 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 SCFD1Q8WVM8 642 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 MED10Q9BTT4 135 aa8.71□□□□□ -1.02
RNU4-59P-201ENST00000364447 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms