RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ADA2Q9NZK5 511 aa14□□□□□ -0.17
LDB3-202ENST00000361373 IPPQ9Y573 584 aa14□□□□□ -0.17
LDB3-202ENST00000361373 RIC1Q4ADV7 1423 aa14□□□□□ -0.17
LDB3-202ENST00000361373 ARHGAP10A1A4S6 786 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 LGALS2P05162 132 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 DMTNQ08495 405 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 KCNMB3Q9NPA1 279 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 CRLS1Q9UJA2 301 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 DRG1Q9Y295 367 aaKnown RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 MORC2Q9Y6X9 1032 aaPredicted RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 C3P01024 1663 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 PRDM16Q9HAZ2 1276 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 DDX43Q9NXZ2 648 aaKnown RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 PKD2L2Q9NZM6 624 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 UBIAD1Q9Y5Z9 338 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 RRM1P23921 792 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 KCNA1Q09470 495 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 KYNUQ16719 465 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 FAM83EQ2M2I3 478 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 TMC7Q7Z402 723 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 MIB1Q86YT6 1006 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 SLC25A41Q8N5S1 370 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 SERPINB12Q96P63 405 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 SLC7A5P2Q9GIP4 190 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 AP4E1Q9UPM8 1137 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 ANGPT2O15123 496 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 UBA1P22314 1058 aaKnown RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 NOGQ13253 232 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 ELOVL4Q9GZR5 314 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 CDY2AQ9Y6F7 541 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 CDY1Q9Y6F8 540 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 AVPR1AP37288 418 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 KCNJ1P48048 391 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 AP2B1P63010 937 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 ACAP1Q15027 740 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 LRRC6Q86X45 466 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
LDB3-202ENST00000361373 RIC8BQ9NVN3 520 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 WHRNQ9P202 907 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 SLC25A13Q9UJS0 675 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 USP18Q9UMW8 372 aa13.99□□□□□ -0.17
LDB3-202ENST00000361373 PRPF4O43172 522 aaKnown RBP eCLIP13.98□□□□□ -0.17
LDB3-202ENST00000361373 AMHP03971 560 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 TKTL1P51854 596 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 MDH1BQ5I0G3 518 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 NYAP1Q6ZVC0 841 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SETD3Q86TU7 594 aaPredicted RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 RNASEH1O60930 286 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 SOAT2O75908 522 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SYF2O95926 243 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 CCR1P32246 355 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 CCNG2Q16589 344 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 POP1Q99575 1024 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 BLOC1S4Q9NUP1 217 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 PSD3Q9NYI0 1048 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SLIT3O75094 1523 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SDR42E2A6NKP2 422 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 PSMD10O75832 226 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 SLC12A3P55017 1021 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 LZTR1Q8N653 840 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 RXFP2Q8WXD0 754 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SLC35C1Q96A29 364 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SMARCD1Q96GM5 515 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 SLC12A8A0AV02 714 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 IRF6O14896 467 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 TIMM44O43615 452 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 KLHL2O95198 593 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 PLEKP08567 350 aaPredicted RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 TUFMP49411 452 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 WASHC5Q12768 1159 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 ZRANB3Q5FWF4 1079 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 TATDN1Q6P1N9 297 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 REXO1L1PQ8IX06 675 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 ZNF606Q8WXB4 792 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 CCDC126Q96EE4 140 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 UBE2OQ9C0C9 1292 aaKnown RBP13.98□□□□□ -0.17
LDB3-202ENST00000361373 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 CD274Q9NZQ7 290 aa13.98□□□□□ -0.17
LDB3-202ENST00000361373 HEATR9A2RTY3 570 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 IL10P22301 178 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 PTGISQ16647 500 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 PAPD7Q5XG87 772 aaKnown RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 TMEM39AQ9NV64 488 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 UXTQ9UBK9 157 aaPredicted RBP13.97□□□□□ -0.17
LDB3-202ENST00000361373 PMPCBO75439 489 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 GHRP10912 638 aa13.97□□□□□ -0.17
LDB3-202ENST00000361373 MAP3K7CLP57077 242 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms