RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CST9Q5W186 159 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 HIBCHQ6NVY1 386 aaPredicted RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 NOTUMQ6P988 496 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 SAE1Q9UBE0 346 aaPredicted RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 ZNF865P0CJ78 1059 aaPredicted RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 DARSP14868 501 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 VCPP55072 806 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 CDC42EP1Q00587 391 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 ZBTB6Q15916 424 aa23.72■■□□□ 1.39
LDB1-201ENST00000361198 C18orf25Q96B23 403 aaPredicted RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 ELAC2Q9BQ52 826 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 MRPL45Q9BRJ2 306 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 NSRP1Q9H0G5 558 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 NXF3Q9H4D5 531 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 FAM124BQ9H5Z6 455 aaPredicted RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 DRG1Q9Y295 367 aaKnown RBP23.72■■□□□ 1.39
LDB1-201ENST00000361198 IGF2BP3O00425 579 aaKnown RBP eCLIP23.71■■□□□ 1.39
LDB1-201ENST00000361198 PFKMP08237 780 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 VIMP08670 466 aaKnown RBP23.71■■□□□ 1.39
LDB1-201ENST00000361198 CD48P09326 243 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 KDELR1P24390 212 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 DYNLT1P63172 113 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 MFSD10Q14728 455 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 RELL1Q8IUW5 271 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 TTC39CQ8N584 583 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 DNAJB3Q8WWF6 145 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 PIWIL1Q96J94 861 aaKnown RBP23.71■■□□□ 1.39
LDB1-201ENST00000361198 HAUS2Q9NVX0 235 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 KIAA1257Q9ULG3 409 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 SLC12A4Q9UP95 1085 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 DERAQ9Y315 318 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 RALGAPA2Q2PPJ7 1873 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 E5RJQ4 531 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 MIPP30301 263 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 ARSEP51690 589 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 TAF5Q15542 800 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 CCL14Q16627 93 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 PPP1R26Q5T8A7 1209 aaPredicted RBP23.71■■□□□ 1.39
LDB1-201ENST00000361198 VSTM1Q6UX27 236 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 TMEM40Q8WWA1 233 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 NKD2Q969F2 451 aaPredicted RBP23.71■■□□□ 1.39
LDB1-201ENST00000361198 TMEM121Q9BTD3 319 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 NINJ2Q9NZG7 142 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 NME7Q9Y5B8 376 aa23.71■■□□□ 1.39
LDB1-201ENST00000361198 SNX3O60493 162 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 IFNAR2P48551 515 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 YARSP54577 528 aaKnown RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 ADAM17P78536 824 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 PLCB3Q01970 1234 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 APBB1IPQ7Z5R6 666 aaPredicted RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 CCHCR1Q8TD31 782 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 GJD2Q9UKL4 321 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 EFR3BQ9Y2G0 817 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 TMEM120BA0PK00 339 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 DNALI1O14645 258 aaPredicted RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 CST8O60676 142 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 RNF8O76064 485 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 OAS1P00973 400 aaKnown RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 AKAP5P24588 427 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 ZNF200P98182 395 aaPredicted RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 GOLGA7BQ2TAP0 167 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 SH3PXD2AQ5TCZ1 1133 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 TRNP1Q6NT89 227 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 ALKAL1Q6UXT8 129 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 FAM183BPQ6ZVS7 135 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 ACOT1Q86TX2 421 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 SLC35B2Q8TB61 432 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 APOL6Q9BWW8 343 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 TRIM6Q9C030 488 aaPredicted RBP23.7■■□□□ 1.38
LDB1-201ENST00000361198 USP18Q9UMW8 372 aa23.7■■□□□ 1.38
LDB1-201ENST00000361198 TREHO43280 583 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 RECQL4O94761 1208 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 ITGAVP06756 1048 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 HUNKP57058 714 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 TAZQ16635 292 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 OR6B2Q6IFH4 312 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 TRPM8Q7Z2W7 1104 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 PARP9Q8IXQ6 854 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 ACTL9Q8TC94 416 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.69■■□□□ 1.38
LDB1-201ENST00000361198 DNAH12Q6ZR08 3092 aa23.69■■□□□ 1.38
LDB1-201ENST00000361198 CREB1P16220 341 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 RGS7P49802 495 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 ZNF143P52747 638 aaPredicted RBP23.68■■□□□ 1.38
LDB1-201ENST00000361198 OTUD4Q01804 1114 aaKnown RBP23.68■■□□□ 1.38
LDB1-201ENST00000361198 GPS1Q13098 491 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 ACAP1Q15027 740 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 BEST2Q8NFU1 509 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 ASNSD1Q9NWL6 643 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 LGALS13Q9UHV8 139 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 ATP2C2O75185 946 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 GRAP2O75791 330 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 TRUB2O95900 331 aaKnown RBP23.68■■□□□ 1.38
LDB1-201ENST00000361198 PSEN2P49810 448 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 BEX3Q00994 111 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 RAB6CQ53S08 254 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 PMF1Q6P1K2 205 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 BBS12Q6ZW61 710 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 TTC30AQ86WT1 665 aa23.68■■□□□ 1.38
LDB1-201ENST00000361198 ZCCHC9Q8N567 271 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms