RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CYP2C8P10632 490 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 KLC1Q07866 573 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 AUHQ13825 339 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 RRP1BQ14684 758 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 SV2CQ496J9 727 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 C4orf22Q6V702 233 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 PTPRN2Q92932 1015 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 TRPV6Q9H1D0 765 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 SARS2Q9NP81 518 aaKnown RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ANLNQ9NQW6 1124 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 SAE1Q9UBE0 346 aaPredicted RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
SCAF1-201ENST00000360565 M0R2N6 131 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 CLGNO14967 610 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 PYGBP11216 843 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 CYP2B6P20813 491 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 SLC26A11Q86WA9 606 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 PALB2Q86YC2 1186 aa16.99■□□□□ 0.31
SCAF1-201ENST00000360565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 CLK2P49760 499 aaKnown RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 BMPR2Q13873 1038 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 EFTUD2Q15029 972 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■■□ 23.5
SCAF1-201ENST00000360565 ASAP3Q8TDY4 903 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 PORCNQ9H237 461 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 CYP3A43Q9HB55 503 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 DDIT4Q9NX09 232 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 CCL15-CCL14A0A0B4J2E2 113 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 TNPO2O14787 897 aaKnown RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 ANP32DO95626 131 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 MYL2P10916 166 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 ENO3P13929 434 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 EEF1B2P24534 225 aaKnown RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 SERPINB4P48594 390 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 SLC26A2P50443 739 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 CCL15Q16663 113 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 FAM200BP0CF97 657 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 GRIK1P39086 918 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 ALDH5A1P51649 535 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 OAZ1P54368 228 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 MAMLD1Q13495 774 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 UGP2Q16851 508 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 KATNAL2Q8IYT4 538 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
SCAF1-201ENST00000360565 ERVK-5Q9HDB9 667 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 BATF3Q9NR55 127 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 TSPAN16Q9UKR8 245 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 SLC39A10Q9ULF5 831 aa16.98■□□□□ 0.31
SCAF1-201ENST00000360565 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ACKR2O00590 384 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 AIM2O14862 343 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ACO1P21399 889 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 GLRA2P23416 452 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 RFC1P35251 1148 aaPredicted RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 NDST1P52848 882 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 NFIL3Q16649 462 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 SPDYCQ5MJ68 293 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PRUNE1Q86TP1 453 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ATPAF2Q8N5M1 289 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ICA1LQ8NDH6 482 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 IPMKQ8NFU5 416 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 KREMEN1Q96MU8 473 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PWWP2AQ96N64 755 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 LOC102724159A0A0B4J2E5 919 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PLSCR1O15162 318 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 KLHL2O95198 593 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PWP2Q15269 919 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ZACNQ401N2 412 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 LCA5Q86VQ0 697 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 LRRC43Q8N309 656 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 AP4E1Q9UPM8 1137 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 PTPRAP18433 802 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 TCP10LQ8TDR4 215 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 SEMA4DQ92854 862 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 ABT1Q9ULW3 272 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 H3BRB1 525 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 GHRP10912 638 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 BGNP21810 368 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 MIPP30301 263 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 TDRD10Q5VZ19 366 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 FGD4Q96M96 766 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 TRIM62Q9BVG3 475 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 TUT1Q9H6E5 874 aaKnown RBP16.97■□□□□ 0.31
SCAF1-201ENST00000360565 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
SCAF1-201ENST00000360565 RNF103-CHMP3A0A140T963 221 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 GSTA4O15217 222 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 ETS1P14921 441 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 XPAP23025 273 aaPredicted RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 EIF4BP23588 611 aaKnown RBP16.96■□□□□ 0.31
SCAF1-201ENST00000360565 PCSK1P29120 753 aa16.96■□□□□ 0.31
SCAF1-201ENST00000360565 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms