RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 SMARCAD1Q9H4L7 1026 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 PRDM16Q9HAZ2 1276 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 KRT82Q9NSB4 513 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 SLC4A7Q9Y6M7 1214 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 PSMG1O95456 288 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 BGNP21810 368 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 PRAMEP78395 509 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 ACVR2BQ13705 512 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 R3HDM1Q15032 1099 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 RYBPQ8N488 228 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 TFB1MQ8WVM0 346 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 PRPF31Q8WWY3 499 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 SNX2O60749 519 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 DEAF1O75398 565 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 E2F6O75461 281 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 VEGFAP15692 232 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 VCAM1P19320 739 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 ROR2Q01974 943 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 ZNF268Q14587 947 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMC3-201ENST00000359440 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 TBC1D10AQ9BXI6 508 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 AP5M1Q9H0R1 490 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 LRMDAQ9H2I8 198 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 AGO4Q9HCK5 861 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 CHST7Q9NS84 486 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 KANSL1LA0AUZ9 987 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 TYW5A2RUC4 315 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 MGRN1O60291 552 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 SERPINE1P05121 402 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 KCNJ2P63252 427 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 CACYBPQ9HB71 228 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 ATP9BO43861 1147 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 NOL4O94818 638 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 CDK7P50613 346 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 NET1Q7Z628 596 aaPredicted RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 TMA16Q96EY4 203 aaKnown RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 FAM193BQ96PV7 902 aaPredicted RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 STN1Q9H668 368 aaKnown RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 LOC100653049A0A140TA62 436 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 ASB14A6NK59 587 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 KRT34O76011 436 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 RALBP11234 206 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 PSMC3P17980 439 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 ATICP31939 592 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 BAG6P46379 1132 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 MMP14P50281 582 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 CASP5P51878 434 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 DNAAF5Q86Y56 855 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 LRRC40Q9H9A6 602 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 DNAJC16Q9Y2G8 782 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 AKAP10O43572 662 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 RASSF9O75901 435 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 CD4P01730 458 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
TMC3-201ENST00000359440 NUDT2P50583 147 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 GTF2BQ00403 316 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 BNIP1Q12981 228 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 ANO4Q32M45 955 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 ZNF606Q8WXB4 792 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 SPATA33Q96N06 139 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 GRIN2DO15399 1336 aa11.73□□□□□ -0.53
TMC3-201ENST00000359440 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
TMC3-201ENST00000359440 C21orf2O43822 256 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 APOC2P02655 101 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 SULT1E1P49888 294 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 CCDC153Q494R4 210 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 CCDC92Q53HC0 331 aaPredicted RBP11.72□□□□□ -0.53
TMC3-201ENST00000359440 THEM5Q8N1Q8 247 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 IDI2Q9BXS1 227 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 PLEKHA5Q9HAU0 1116 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
TMC3-201ENST00000359440 USP18Q9UMW8 372 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 DDX3YO15523 660 aaKnown RBP11.72□□□□□ -0.53
TMC3-201ENST00000359440 ZCCHC18P0CG32 403 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 PTGER2P43116 358 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 PCYT1AP49585 367 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 QPCTQ16769 361 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
TMC3-201ENST00000359440 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 MFSD7Q6UXD7 560 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 LCA5Q86VQ0 697 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
TMC3-201ENST00000359440 ZNF669Q96BR6 464 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms