RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 MARK4Q96L34 752 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 BTBD9Q96Q07 612 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ETNK1Q9HBU6 452 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 GPRC5DQ9NZD1 345 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ZNHIT2Q9UHR6 403 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 INVSQ9Y283 1065 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FAM32AQ9Y421 112 aaKnown RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 TUBB4AP04350 444 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 TUBBP07437 444 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ZSCAN5DPP0CG00 497 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 CTPS1P17812 591 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 CHI3L2Q15782 390 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 CBWD3Q5JTY5 395 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 CBWD5Q5RIA9 395 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 RPAINQ86UA6 219 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SPATA20Q8TB22 786 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FICDQ9BVA6 458 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PXMP2Q9NR77 195 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 DDX56Q9NY93 547 aaKnown RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PAIP2BQ9ULR5 123 aaKnown RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FAM50BQ9Y247 325 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 CHURC1-FNTBB4DL54 471 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PTGER2P43116 358 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SLC11A2P49281 568 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ADGRF2Q8IZF7 708 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ALLCQ8N6M5 410 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 NDE1Q9NXR1 346 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 MDM4O15151 490 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 RGS5O15539 181 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 HAUS5O94927 633 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 IFNA16P05015 189 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 USP17L7P0C7H9 530 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FEN1P39748 380 aaKnown RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ATP12AP54707 1039 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 BMPR2Q13873 1038 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 NYAP1Q6ZVC0 841 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PLEKHM3Q6ZWE6 761 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 NECAB2Q7Z6G3 386 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PRSS58Q8IYP2 241 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ATP6V0D2Q8N8Y2 350 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ING5Q8WYH8 240 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PACSIN1Q9BY11 444 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 C19orf81C9J6K1 198 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 NDUFS2O75306 463 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 KRT7P08729 469 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 UBTFL6P0CB48 400 aaPredicted RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 OR1E1P30953 314 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 BRCC3P46736 316 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 TUBB4BP68371 445 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SGCGQ13326 291 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SYTL1Q8IYJ3 562 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 ECSITQ9BQ95 431 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 F8W8V4 182 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FOXN3O00409 490 aaPredicted RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 HSPA8P11142 646 aaKnown RBP7.63□□□□□ -1.19
VPS13A-202ENST00000357409 SEC24CP53992 1094 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 RAD23BP54727 409 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 C11orf63Q6NUN7 778 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 GAD1Q99259 594 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 TRPM5Q9NZQ8 1165 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 PCDHB12Q9Y5F1 795 aa7.63□□□□□ -1.19
VPS13A-202ENST00000357409 FUT4P22083 530 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 POU4F1Q01851 419 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 C16orf87Q6PH81 154 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 NPNTQ6UXI9 565 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 OSER1Q9NX31 292 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 POLG2Q9UHN1 485 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CD84Q9UIB8 345 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 NBNO60934 754 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CALB1P05937 261 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 TSC22D1Q15714 1073 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 DEPDC1Q5TB30 811 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CAAP1Q9H8G2 361 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 MYPNQ86TC9 1320 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 KCNK1O00180 336 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CD4P01730 458 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 ALAS2P22557 587 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CAMK2GQ13555 558 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-202ENST00000357409 RABGAP1LQ5R372 815 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 DCP1BQ8IZD4 617 aaKnown RBP7.62□□□□□ -1.19
VPS13A-202ENST00000357409 MED15Q96RN5 788 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 H0Y858 1186 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 IL1BP01584 269 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 GTF2A2P52657 109 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 NDST1P52848 882 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 TARBP2Q15633 366 aaKnown RBP7.62□□□□□ -1.19
VPS13A-202ENST00000357409 FGD2Q7Z6J4 655 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 MAB21L3Q8N8X9 362 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 TTC13Q8NBP0 860 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CD99L2Q8TCZ2 262 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 MED4Q9NPJ6 270 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 RBM22Q9NW64 420 aaKnown RBP eCLIP7.62□□□□□ -1.19
VPS13A-202ENST00000357409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.194e-8■■■■□ 23.2
VPS13A-202ENST00000357409 KRT38O76015 456 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 KRT4P19013 534 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CEP68Q76N32 757 aa7.62□□□□□ -1.19
VPS13A-202ENST00000357409 R3HCC1LQ7Z5L2 792 aaKnown RBP7.62□□□□□ -1.19
VPS13A-202ENST00000357409 CDKL3Q8IVW4 592 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms