RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TTC30AQ86WT1 665 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 LEMD2Q8NC56 503 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 RIPOR3Q96MK2 946 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 TMEM30AQ9NV96 361 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 H3BQ06 376 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 XPO1O14980 1071 aaKnown RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 BEST1O76090 585 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 ADCY5O95622 1261 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 CALCAP01258 141 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 GPR15P49685 360 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 ASIC2Q16515 512 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 PKDCCQ504Y2 493 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 GIPC2Q8TF65 315 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 LHX5Q9H2C1 402 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
TRIM13-201ENST00000356017 BZW2Q9Y6E2 419 aaKnown RBP16.43■□□□□ 0.22
TRIM13-201ENST00000356017 SLC38A8A6NNN8 435 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 FGF19O95750 216 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 CDC25BP30305 580 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 MTHFRP42898 656 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 CDR2Q01850 454 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 PDE4CQ08493 712 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 PUS10Q3MIT2 529 aaKnown RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 CYP4A22Q5TCH4 519 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 IRF2BP2Q7Z5L9 587 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 NOP9Q86U38 636 aaKnown RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 CNGA4Q8IV77 575 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 SLC35F5Q8WV83 523 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 DDX1Q92499 740 aaKnown RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 TRMT2BQ96GJ1 504 aaKnown RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 MYRFLQ96LU7 910 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 APOL5Q9BWW9 433 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 FBXO44Q9H4M3 255 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 ASAH2Q9NR71 780 aa16.42■□□□□ 0.22
TRIM13-201ENST00000356017 UXTQ9UBK9 157 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-201ENST00000356017 PRKCIP41743 596 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 GPD2P43304 727 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 TBX2Q13207 712 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 LEXMQ3ZCV2 418 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 PIGZQ86VD9 579 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 OR8K1Q8NGG5 319 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 NOX5Q96PH1 765 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 CORO1BQ9BR76 489 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 ZNHIT6Q9NWK9 470 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 HHLA1C9JL84 531 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 AKR1B15C9JRZ8 316 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 ZNF197O14709 1029 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 LSM8O95777 96 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 RHOP08100 348 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 MRE11P49959 708 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 SLC5A3P53794 718 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 EPHA5P54756 1037 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 SNX16P57768 344 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 KLHL30Q0D2K2 578 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 GSE1Q14687 1217 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 CLUL1Q15846 466 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 PABPC1LQ4VXU2 614 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 PDZD4Q76G19 769 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 TMEM35BQ8NCS4 154 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 HSFY1Q96LI6 401 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 TTLL2Q9BWV7 592 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 LRRC4Q9HBW1 653 aa16.41■□□□□ 0.22
TRIM13-201ENST00000356017 WDR6Q9NNW5 1121 aaKnown RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 AVENQ9NQS1 362 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-201ENST00000356017 MFAP3LO75121 409 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 MMEP08473 750 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 YWHAQP27348 245 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 HNRNPH3P31942 346 aaKnown RBP16.4■□□□□ 0.22
TRIM13-201ENST00000356017 SSTR3P32745 418 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-201ENST00000356017 ACADSBP45954 432 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 PPP3CCP48454 512 aa16.4■□□□□ 0.22
TRIM13-201ENST00000356017 CBX2Q14781 532 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-201ENST00000356017 ARID5BQ14865 1188 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms