RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 TLR10Q9BXR5 811 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 DYRK4Q9NR20 520 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 LSM7Q9UK45 103 aaKnown RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 A0A087WZ62 844 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 LY6KQ17RY6 165 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 MST1RQ04912 1400 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 MAP4P27816 1152 aaKnown RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 SNX17Q15036 470 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 PTRHD1Q6GMV3 140 aaKnown RBP16.62■□□□□ 0.25
PTPN11-201ENST00000351677 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 SLC5A5Q92911 643 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 TMEM176AQ96HP8 235 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
PTPN11-201ENST00000351677 CXCL9Q07325 125 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 CCNG2Q16589 344 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 SYTL3Q4VX76 610 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ZRANB3Q5FWF4 1079 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ARHGAP18Q8N392 663 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 RXFP2Q8WXD0 754 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.254e-15■■■■■ 27.5
PTPN11-201ENST00000351677 B3GAT3O94766 335 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PDK2Q15119 407 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ABRAQ8N0Z2 381 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 DACH2Q96NX9 599 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 FRMD8P1Q9BZ68 369 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-201ENST00000351677 KCTD10Q9H3F6 313 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ASMTLO95671 621 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 SGO1Q5FBB7 561 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PCYOX1LQ8NBM8 494 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 CYB561D2O14569 222 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ZSCAN9O15535 394 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-201ENST00000351677 UBTFL6P0CB48 400 aaPredicted RBP16.61■□□□□ 0.25
PTPN11-201ENST00000351677 CHRM3P20309 590 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 HUNKP57058 714 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PAN2Q504Q3 1202 aaKnown RBP16.61■□□□□ 0.25
PTPN11-201ENST00000351677 APOL2Q9BQE5 337 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 RHOBTB1O94844 696 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PYGMP11217 842 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ODC1P11926 461 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 THPOP40225 353 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 SCTRP47872 440 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 LAMB3Q13751 1172 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PTK6Q13882 451 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 ITIH4Q14624 930 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 SLFN11Q7Z7L1 901 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 CYGBQ8WWM9 190 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 BHMTQ93088 406 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PPP1R2P1Q96PQ5 205 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 V9GYQ6 96 aa16.61■□□□□ 0.25
PTPN11-201ENST00000351677 PTPN11Q06124 597 aaPredicted RBP16.6■□□□□ 0.25
PTPN11-201ENST00000351677 MYBPC2Q14324 1141 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 LINC00523Q86TU6 105 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 ADGRF2Q8IZF7 708 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 LZICQ8WZA0 190 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 GRIK5Q16478 980 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 CNPY3Q9BT09 278 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 GPR63Q9BZJ6 419 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 AP4E1Q9UPM8 1137 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 SDR42E2A6NKP2 422 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 SASH3O75995 380 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 ANXA9O76027 345 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 PTPN7P35236 360 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 NUDT2P50583 147 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 COPAP53621 1224 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 APOBEC3HQ6NTF7 200 aaKnown RBP16.6■□□□□ 0.25
PTPN11-201ENST00000351677 CLEC4FQ8N1N0 589 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 KIAA1257Q9ULG3 409 aa16.6■□□□□ 0.25
PTPN11-201ENST00000351677 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 NQO1P15559 274 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 HARS2P49590 506 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 ERVK-9P63128 1117 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 DAB2P98082 770 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 STKLD1Q8NE28 680 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 ACTL9Q8TC94 416 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 EIF2AQ9BY44 585 aaKnown RBP16.59■□□□□ 0.25
PTPN11-201ENST00000351677 HNRNPCL2B2RXH8 293 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 TISP43B9A030 160 aa16.59■□□□□ 0.25
PTPN11-201ENST00000351677 C2CD2LO14523 706 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms