RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 FIGNQ5HY92 759 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 SPDYCQ5MJ68 293 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 TBC1D9BQ66K14 1250 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CNKSR3Q6P9H4 555 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 SPATA21Q7Z572 469 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CROCCP2Q86T23 111 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM114A1Q8IWE2 563 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 GRAMD1CQ8IYS0 662 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 RNF10Q8N5U6 811 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 GBP7Q8N8V2 638 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 CFAP61Q8NHU2 1237 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 B4GALNT2Q8NHY0 566 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 HDAC7Q8WUI4 952 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 NELFBQ8WX92 580 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 IFT81Q8WYA0 676 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 GORASP1Q9BQQ3 440 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 TRIM4Q9C037 500 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 NHEJ1Q9H9Q4 299 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 EPB41L5Q9HCM4 733 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 LUC7LQ9NQ29 371 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 SAMD15Q9P1V8 674 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 NFU1Q9UMS0 254 aa8.25□□□□□ -1.09
UBE2D3-204ENST00000349311 COL11A2P13942 1736 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TIAM2Q8IVF5 1701 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 DUOX1Q9NRD9 1551 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 MACROD2A1Z1Q3 448 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM90A27PA6NNH2 459 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 GOLGA8AA7E2F4 631 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 B4DLN1 442 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CES2O00748 559 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ZBTB43O43298 467 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ATP2C2O75185 946 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 PDE8BO95263 885 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 MMP1P03956 469 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 PARP1P09874 1014 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ZBTB48P10074 688 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 SRGNP10124 158 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CYP2C8P10632 490 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 FGFR2P21802 821 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CDC25AP30304 524 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TM4SF1P30408 202 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CARSP49589 748 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 SH3BGRP55822 239 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 EIF3BP55884 814 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ANTXR2P58335 489 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 GUCY2DQ02846 1103 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 MAP3K12Q12852 859 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 PAN2Q504Q3 1202 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TMEM177Q53S58 311 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 THEMIS2Q5TEJ8 643 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF658Q5TYW1 1059 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 WDR59Q6PJI9 974 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 HOOK3Q86VS8 718 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 NIM1KQ8IY84 436 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM81AQ8TBF8 368 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 AGAP11Q8TF27 550 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TEKT4Q8WW24 435 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CASKIN2Q8WXE0 1202 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CCDC42Q96M95 316 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TRAPPC9Q96Q05 1148 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 RAB3IPQ96QF0 476 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 SYT3Q9BQG1 590 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 C11orf84Q9BUA3 381 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 PUS3Q9BZE2 481 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CD244Q9BZW8 370 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 MTFR1LQ9H019 292 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CSRNP2Q9H175 543 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ISCUQ9H1K1 167 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 VCXQ9H320 206 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 CNNM1Q9NRU3 951 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 GJB4Q9NTQ9 266 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 RPS6KL1Q9Y6S9 549 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
UBE2D3-204ENST00000349311 TRIM75PA6NK02 468 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 TRAF5O00463 557 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF213O14771 459 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 CREB3O43889 395 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 LCA5LO95447 670 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 MYBP10242 640 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 GYS1P13807 737 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ATP2A2P16615 1042 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 PPP1R2P41236 205 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 STAT5AP42229 794 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 GUCY2FP51841 1108 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ITGA1P56199 1179 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 MTA1Q13330 715 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ADAM9Q13443 819 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ZRSR2Q15696 482 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 FAM153CQ494X1 144 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 PRR31Q5SQ13 230 aa8.23□□□□□ -1.09
UBE2D3-204ENST00000349311 ERMARDQ5T6L9 678 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms