RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 JMJD4Q9H9V9 463 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PLEKHA5Q9HAU0 1116 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 MYMKA6NI61 221 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PDLIM1O00151 329 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 TRIM24O15164 1050 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ZNF185O15231 689 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ENTPD3O75355 529 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PTPN4P29074 926 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 TKTP29401 623 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 HUNKP57058 714 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 NAA20P61599 178 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ZNF235Q14590 738 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 DDX53Q86TM3 631 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ULK4Q96C45 1275 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 KCNK16Q96T55 309 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 GRIP2Q9C0E4 1043 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 NYAP2Q9P242 653 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 RAB21Q9UL25 225 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 MTO1Q9Y2Z2 717 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PRR23AA6NEV1 266 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 RAD51BO15315 384 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 LGR5O75473 907 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 MAP3K10Q02779 954 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PDIA5Q14554 519 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TBCCQ15814 346 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FAM151AQ8WW52 585 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PPP1R36Q96LQ0 422 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ZBTB18Q99592 522 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FAM49BQ9NUQ9 324 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SUN2Q9UH99 717 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 COQ6Q9Y2Z9 468 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PDXKO00764 312 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 KRT36O76013 467 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ACADVLP49748 655 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ARSEP51690 589 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 CDK17Q00537 523 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 KDSRQ06136 332 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 NCAPHQ15003 741 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 RBBP7Q16576 425 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 IZUMO3Q5VZ72 239 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 CLVS1Q8IUQ0 354 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ARL8AQ96BM9 186 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FAM118BQ9BPY3 351 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TBCCD1Q9NVR7 557 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 LIMA1Q9UHB6 759 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 A0A1W2PQ72 361 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 F8W810 466 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 DGAT1O75907 488 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ITGAXP20702 1163 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FGFR4P22455 802 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ERFP50548 548 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SNRNP35Q16560 246 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 USP49Q70CQ1 688 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TNIP3Q96KP6 325 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 OSBPL8Q9BZF1 889 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ALG13Q9NP73 1137 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PCDH12Q9NPG4 1184 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TECPR2O15040 1411 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 UNC13BO14795 1591 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ASMTLO95671 621 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TPI1P60174 286 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 KRT17Q04695 432 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 NCOA4Q13772 614 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 EFCAB12Q6NXP0 572 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 MYO1HQ8N1T3 1032 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ZNF786Q8N393 782 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 CMTM5Q96DZ9 223 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ALDH8A1Q9H2A2 487 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 NPHS2Q9NP85 383 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SLC12A4Q9UP95 1085 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FADS3Q9Y5Q0 445 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 KDM6AO15550 1401 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 KCNN4O15554 427 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SLC9A3P48764 834 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SESN2P58004 480 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 CDKL3Q8IVW4 592 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 YAF2Q8IY57 180 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 ZNF555Q8NEP9 628 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 TAAR1Q96RJ0 339 aa11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
SMARCE1-202ENST00000348513 SPATA31A5Q5VU36 1347 aa11.49□□□□□ -0.57
SMARCE1-202ENST00000348513 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms