RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OTOAQ7RTW8 1153 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CEP57Q86XR8 500 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 EGFL6Q8IUX8 553 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TP53INP2Q8IXH6 220 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MPP5Q8N3R9 675 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 FBXO36Q8NEA4 188 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 DYDC1Q8WWB3 177 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SLC7A6OSQ96CW6 309 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 RUNDC3BQ96NL0 473 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TRABDQ9H4I3 376 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 VPS37BQ9H9H4 285 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 AS3MTQ9HBK9 375 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MRPL47Q9HD33 250 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CACNG4Q9UBN1 327 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 BAIAP2L1Q9UHR4 511 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 HAO1Q9UJM8 370 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 PHTF1Q9UMS5 762 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 PCDHGC3Q9UN70 934 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 STK38LQ9Y2H1 464 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CITO14578 2027 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 DNAJC25-GNG10A0A024R161 153 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 HMX2A2RU54 273 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SIGLEC16A6NMB1 481 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 RPSAP08865 295 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 NQO1P15559 274 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CD1EP15812 388 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MAN1A1P33908 653 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 OLIG2Q13516 323 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CTC1Q2NKJ3 1217 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SGSM1Q2NKQ1 1148 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SLFN12LQ6IEE8 588 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 PMF1Q6P1K2 205 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 TLDC1Q6P9B6 456 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 ZPBP2Q6X784 338 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 LRRC6Q86X45 466 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 CCDC89Q8N998 374 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 FBXO27Q8NI29 283 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 NKD2Q969F2 451 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MAGEB18Q96M61 343 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SPATA33Q96N06 139 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 DPEP3Q9H4B8 488 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 KCNK13Q9HB14 408 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 USP29Q9HBJ7 922 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 ARHGEF3Q9NR81 526 aa6.34□□□□□ -1.39
CLCN3-201ENST00000347613 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLCN3-201ENST00000347613 DOCK3Q8IZD9 2030 aa6.34□□□□□ -1.4
CLCN3-201ENST00000347613 CDH16O75309 829 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 LGR5O75473 907 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 C22orf31O95567 290 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TRUB2O95900 331 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ITGAVP06756 1048 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 STAG3L1P0CL83 205 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ARF4P18085 180 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TBXAS1P24557 533 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 STX2P32856 288 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 BPIFB4P59827 614 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ENPEPQ07075 957 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CLUL1Q15846 466 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 NOL9Q5SY16 702 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MARCH8Q5T0T0 291 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 DRICH1Q6PGQ1 229 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 C1orf228Q6PIY5 440 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 C3orf62Q6ZUJ4 267 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 FAM183BPQ6ZVS7 135 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 SCUBE3Q8IX30 993 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PQLC3Q8N755 202 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 NIPA2Q8N8Q9 360 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 L3MBTL3Q96JM7 780 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 FAM81BQ96LP2 452 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MRPL45Q9BRJ2 306 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 DHRS4Q9BTZ2 278 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MECRQ9BV79 373 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PDZD7Q9H5P4 517 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ACTR5Q9H9F9 607 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 IL1RAPL1Q9NZN1 696 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MCM8Q9UJA3 840 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CHMP2BQ9UQN3 213 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 XIRP2A4UGR9 3374 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 FAM47DPA6NHR8 397 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CILPO75339 1184 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 LDHAP00338 332 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 INSRRP14616 1297 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 COPS2P61201 443 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PITX1P78337 314 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ATP11AP98196 1134 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CCDC14Q49A88 953 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PREPLQ4J6C6 727 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PPP1R26Q5T8A7 1209 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 RFWD3Q6PCD5 774 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 LVRNQ6Q4G3 990 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TAOK1Q7L7X3 1001 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CTU1Q7Z7A3 348 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TTC30AQ86WT1 665 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms