RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 FAM71DQ8N9W8 422 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 CMASQ8NFW8 434 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 PYROXD1Q8WU10 500 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 TACO1Q9BSH4 297 aaKnown RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 PHACTR1Q9C0D0 580 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 SSU72Q9NP77 194 aaKnown RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 SLC17A7Q9P2U7 560 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 FETUBQ9UGM5 382 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 USP2O75604 605 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 ARL4CP56559 192 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 MBTD1Q05BQ5 628 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 MMRN1Q13201 1228 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 SURF1Q15526 300 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 C3orf62Q6ZUJ4 267 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 PCGF5Q86SE9 256 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 ZBTB8OSQ8IWT0 167 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 ATP11CQ8NB49 1132 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 LRRC8CQ8TDW0 803 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 KLF6Q99612 283 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 LRMDAQ9H2I8 198 aa15.23■□□□□ 0.03
ARHGEF1-202ENST00000347545 ACKR2O00590 384 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 TRUB2O95900 331 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 TNNC2P02585 160 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 CYP3A5P20815 502 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 VGLL4Q14135 290 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 BANPQ8N9N5 519 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 HSPH1Q92598 858 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 SLC7A6OSQ96CW6 309 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 NLRP4Q96MN2 994 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 PPCSQ9HAB8 311 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 RGS17Q9UGC6 210 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 HAO1Q9UJM8 370 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 C15orf41Q9Y2V0 281 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 TRIP11Q15643 1979 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 GOLGA8RI6L899 631 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 GPR25O00155 361 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 CNMDO75829 334 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 MICAL2O94851 1124 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 ZBTB7AO95365 584 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 KRT19P08727 400 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 RFX6Q8HWS3 928 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 PTPRN2Q92932 1015 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 MIEF2Q96C03 454 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 MCRS1Q96EZ8 462 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 ANKRD36BP1Q96IX9 119 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 PIWIL1Q96J94 861 aaKnown RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 FAM167AQ96KS9 214 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 FRMD8P1Q9BZ68 369 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 SPATC1LQ9H0A9 340 aa15.22■□□□□ 0.03
ARHGEF1-202ENST00000347545 PGK2P07205 417 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 GABRB2P47870 512 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 EIF3EP60228 445 aaKnown RBP15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 HHATQ5VTY9 493 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 NCAPG2Q86XI2 1143 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 TCP10LQ8TDR4 215 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 RSAD2Q8WXG1 361 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 APOC2P02655 101 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 TGFB3P10600 412 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 CLCN3P51790 818 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 BBS9Q3SYG4 887 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 SYCP2LQ5T4T6 812 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 TTC13Q8NBP0 860 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 KCTD6Q8NC69 237 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 SLC16A10Q8TF71 515 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 COPS5Q92905 334 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 CHMP2BQ9UQN3 213 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 PLXNA1Q9UIW2 1896 aa15.21■□□□□ 0.03
ARHGEF1-202ENST00000347545 WDR91A4D1P6 747 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CILPO75339 1184 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CSDE1O75534 798 aaKnown RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 ZWINTO95229 277 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 DPYSL3Q14195 570 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 HADHQ16836 314 aaKnown RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CELF3Q5SZQ8 465 aaKnown RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 JADE1Q6IE81 842 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 RFWD2Q8NHY2 731 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 LRRC37BQ96QE4 947 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 C2orf40Q9H1Z8 148 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 USP18Q9UMW8 372 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 INO80B-WBP1J3KQ70 363 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 MED7O43513 233 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 KIF1CO43896 1103 aaKnown RBP15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 ENDOD1O94919 500 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CBX6O95503 412 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 GM2AP17900 193 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CCND1P24385 295 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 GPD2P43304 727 aa15.2■□□□□ 0.02
ARHGEF1-202ENST00000347545 CTC1Q2NKJ3 1217 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms