RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SPATA31A1Q5TZJ5 1347 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 CSF1RP07333 972 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 ITGALP20701 1170 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 GPC1P35052 558 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 NAMPTP43490 491 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 MROH9Q5TGP6 573 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 DDX42Q86XP3 938 aaKnown RBP eCLIP23.94■■□□□ 1.42
NPAS3-201ENST00000346562 MROH8Q9H579 483 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 PALMDQ9NP74 551 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 DCDC2Q9UHG0 476 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 ALG6Q9Y672 507 aa23.94■■□□□ 1.42
NPAS3-201ENST00000346562 OGTO15294 1046 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 DGKIO75912 1065 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 GCLCP48506 637 aaPredicted RBP23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CYB561D2O14569 222 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 RAD51CO43502 376 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 KPNA1P52294 538 aaPredicted RBP23.93■■□□□ 1.42
NPAS3-201ENST00000346562 SAMD3Q8N6K7 520 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 DMAP1Q9NPF5 467 aaPredicted RBP23.93■■□□□ 1.42
NPAS3-201ENST00000346562 RBM12Q9NTZ6 932 aaKnown RBP23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CAND2O75155 1236 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CLK1P49759 484 aaKnown RBP23.93■■□□□ 1.42
NPAS3-201ENST00000346562 SAMD7Q7Z3H4 446 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 FBXO33Q7Z6M2 555 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CYP4Z1Q86W10 505 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CNDP1Q96KN2 507 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 GLRA3O75311 464 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 NTSR2O95665 410 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 HSPA13P48723 471 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 AMHR2Q16671 573 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 NT5DC4Q86YG4 428 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 BHMTQ93088 406 aa23.93■■□□□ 1.42
NPAS3-201ENST00000346562 CTCFP49711 727 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 STX5Q13190 355 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 PLD1Q13393 1074 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 MMGT1Q8N4V1 131 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ERP27Q96DN0 273 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ZNF333Q96JL9 665 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 GPR75-ASB3A0A0A6YYF3 556 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ATXN3P54252 364 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 PAN2Q504Q3 1202 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 CAPRIN2Q6IMN6 1127 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ITIH5Q86UX2 942 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 CCDC60Q8IWA6 550 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 PHACTR4Q8IZ21 702 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 DAGLBQ8NCG7 672 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 SMARCAL1Q9NZC9 954 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 M0R3G1 203 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ACO1P21399 889 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 AVPR1AP37288 418 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 KCTD10Q9H3F6 313 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 TMEM120BA0PK00 339 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 CRTAMO95727 393 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 SUPT20HL2P0C7V6 817 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 PSMA4P25789 261 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ANGPT1Q15389 498 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 LRRC36Q1X8D7 754 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 GALNT4Q8N4A0 578 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 USP38Q8NB14 1042 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 NFKBIZQ9BYH8 718 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 LNPEPQ9UIQ6 1025 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 TUBE1Q9UJT0 475 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 EIF4E1BA6NMX2 242 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 KPNA6O60684 536 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ITGA9Q13797 1035 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 ERP44Q9BS26 406 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 IMPAD1Q9NX62 359 aa23.92■■□□□ 1.42
NPAS3-201ENST00000346562 DRG1Q9Y295 367 aaKnown RBP23.92■■□□□ 1.42
NPAS3-201ENST00000346562 TRPM1Q7Z4N2 1603 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CNTNAP4Q9C0A0 1308 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 B2RBV5 119 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 GLRA4Q5JXX5 417 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 MRPL48Q96GC5 212 aaKnown RBP23.91■■□□□ 1.42
NPAS3-201ENST00000346562 THUMPD3Q9BV44 507 aaKnown RBP23.91■■□□□ 1.42
NPAS3-201ENST00000346562 ILKAPQ9H0C8 392 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-201ENST00000346562 ISCUQ9H1K1 167 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CKMP06732 381 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 YY1P25490 414 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 LHX1P48742 406 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 FNTAP49354 379 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 RNF103O00237 685 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 ALBP02768 609 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CKBP12277 381 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 PBLDP30039 288 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-201ENST00000346562 LAYNQ6UX15 382 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 SLFN11Q7Z7L1 901 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CENPLQ8N0S6 344 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-201ENST00000346562 AGPAT3Q9NRZ7 376 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 B3GAT3O94766 335 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 RHOCP08134 193 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 PDIA6Q15084 440 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CCDC157Q569K6 752 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 SLC20A1Q8WUM9 679 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 NSL1Q96IY1 281 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 CLPBQ9H078 707 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 GTF3C4Q9UKN8 822 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 PXDNLA1KZ92 1463 aa23.91■■□□□ 1.42
NPAS3-201ENST00000346562 MSH4O15457 936 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 BCAT1P54687 386 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 TRIP10Q15642 601 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms