RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GRIK1P39086 918 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 PIK3CAP42336 1068 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MAGEA9P43362 315 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 ASPAP45381 313 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 ISM2Q6H9L7 571 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 PAQR9Q6ZVX9 377 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 TAS1R2Q8TE23 839 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 SPATA17Q96L03 361 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 CHRDQ9H2X0 955 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 APOBEC3GQ9HC16 384 aaKnown RBP15.37■□□□□ 0.05
HMGN3-202ENST00000344726 RBM12Q9NTZ6 932 aaKnown RBP15.37■□□□□ 0.05
HMGN3-202ENST00000344726 UXTQ9UBK9 157 aaPredicted RBP15.37■□□□□ 0.05
HMGN3-202ENST00000344726 FBXO4Q9UKT5 387 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MRPS17Q9Y2R5 130 aaKnown RBP15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MYO16Q9Y6X6 1858 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 ZNF292O60281 2723 aa15.37■□□□□ 0.05
HMGN3-202ENST00000344726 MYOFQ9NZM1 2061 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 SPECC1L-ADORA2AF8WAN1 911 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 DPYSL4O14531 572 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CLSTN1O94985 981 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 SMC2O95347 1197 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 KRT13P13646 458 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CTHP32929 405 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CSTF1Q05048 431 aaKnown RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ENPEPQ07075 957 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ORC1Q13415 861 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ANKRD40Q6AI12 368 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 TRIM68Q6AZZ1 485 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 MON1AQ86VX9 555 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ZC3H3Q8IXZ2 948 aaKnown RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 ADSSL1Q8N142 457 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CELF5Q8N6W0 485 aaKnown RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CSGALNACT1Q8TDX6 532 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 MRPS31Q92665 395 aaKnown RBP15.36■□□□□ 0.05
HMGN3-202ENST00000344726 TAF4BQ92750 862 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 NELL1Q92832 810 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 CYP2S1Q96SQ9 504 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 LMAN1LQ9HAT1 526 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 HPS4Q9NQG7 708 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 C2orf42Q9NWW7 574 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 MAN1B1Q9UKM7 699 aa15.36■□□□□ 0.05
HMGN3-202ENST00000344726 C2orf78A6NCI8 922 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 TRIM66O15016 1216 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 NCAM2O15394 837 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 BMP6P22004 513 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 HOXC13P31276 330 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 AVPR1AP37288 418 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 KPNA1P52294 538 aaPredicted RBP15.35■□□□□ 0.05
HMGN3-202ENST00000344726 NDST1P52848 882 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 ZNF528Q3MIS6 628 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 Q6ZS52 159 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 DENND5BQ6ZUT9 1274 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 ACOT1Q86TX2 421 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 C8orf48Q96LL4 319 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 TTLL2Q9BWV7 592 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 TMEM8AQ9HCN3 771 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 TDP1Q9NUW8 608 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 GCNT4Q9P109 453 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 ZMYM5Q9UJ78 669 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 PTPRZ1P23471 2315 aaPredicted RBP15.35■□□□□ 0.05
HMGN3-202ENST00000344726 GPR179Q6PRD1 2367 aa15.35■□□□□ 0.05
HMGN3-202ENST00000344726 OTOGLQ3ZCN5 2332 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 SOBPA7XYQ1 873 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 CETN3O15182 167 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 KINO60870 393 aaKnown RBP15.34■□□□□ 0.05
HMGN3-202ENST00000344726 ARSAP15289 507 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 ANXA13P27216 316 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 NOP14P78316 857 aaKnown RBP15.34■□□□□ 0.05
HMGN3-202ENST00000344726 ZXDBP98169 803 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 PON2Q15165 354 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 NAIF1Q69YI7 327 aaPredicted RBP15.34■□□□□ 0.05
HMGN3-202ENST00000344726 FAM35AQ86V20 835 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 FUKQ8N0W3 1084 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 SUMF1Q8NBK3 374 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 ZBTB44Q8NCP5 570 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 CEP295NLQ96MC4 621 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 TWNKQ96RR1 684 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 KCNK16Q96T55 309 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 ELOVL4Q9GZR5 314 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 TRPC7Q9HCX4 862 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 GKN1Q9NS71 199 aa15.34■□□□□ 0.05
HMGN3-202ENST00000344726 EP300Q09472 2414 aaPredicted RBP15.33■□□□□ 0.04
HMGN3-202ENST00000344726 DCHS1Q96JQ0 3298 aa15.33■□□□□ 0.04
HMGN3-202ENST00000344726 LMNAP02545 664 aaKnown RBP15.33■□□□□ 0.04
HMGN3-202ENST00000344726 EPB41P11171 864 aaKnown RBP15.33■□□□□ 0.04
HMGN3-202ENST00000344726 P4HA1P13674 534 aa15.33■□□□□ 0.04
HMGN3-202ENST00000344726 CCDC130P13994 396 aa15.33■□□□□ 0.04
HMGN3-202ENST00000344726 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
HMGN3-202ENST00000344726 SATB1Q01826 763 aa15.33■□□□□ 0.04
HMGN3-202ENST00000344726 INCA1Q0VD86 236 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms