RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TSPAN1O60635 241 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 UBOX5O94941 541 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 MAP3K6O95382 1288 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 OAS1P00973 400 aaKnown RBP15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 RBP3P10745 1247 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 GHRP10912 638 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 GPX6P59796 221 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 SCYL2Q6P3W7 929 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 PPIL6Q8IXY8 311 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 PYROXD1Q8WU10 500 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 RXFP2Q8WXD0 754 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 ACAP3Q96P50 834 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 ASB7Q9H672 318 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 FAM49BQ9NUQ9 324 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 GPATCH2LQ9NWQ4 482 aa15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
VIPAS39-202ENST00000343765 A0A1W2PPM1 405 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 MCF2LO15068 1137 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 TMEM63AO94886 807 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 SUN1O94901 812 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 VDRP11473 427 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 KIZQ2M2Z5 673 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 CYB5D1Q6P9G0 228 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 C1orf228Q6PIY5 440 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 MTHFD1LQ6UB35 978 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 PPP1R21Q6ZMI0 780 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 FUKQ8N0W3 1084 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 TTC13Q8NBP0 860 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 LRRN4Q8WUT4 740 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 MAK16Q9BXY0 300 aaKnown RBP15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 ASNSD1Q9NWL6 643 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 BARX2Q9UMQ3 279 aaPredicted RBP15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 CLUHO75153 1309 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 HMGCRP04035 888 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 ATICP31939 592 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 ARL4CP56559 192 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 FAM187BQ17R55 369 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 GOLGA7BQ2TAP0 167 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 ICE2Q659A1 982 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 CGB2Q6NT52 195 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 MAGEB18Q96M61 343 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 SMC6Q96SB8 1091 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 CYP3A43Q9HB55 503 aa15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 XPO7Q9UIA9 1087 aaKnown RBP15.59■□□□□ 0.09
VIPAS39-202ENST00000343765 H3BRB1 525 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 PPEF2O14830 753 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 MAGEB2O15479 319 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 TAC1P20366 129 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 GPD1P21695 349 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 IL9RQ01113 521 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 DNAJC3Q13217 504 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 SNAPC2Q13487 334 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 C9orf131Q5VYM1 1079 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 DARS2Q6PI48 645 aaKnown RBP15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 MAMDC4Q6UXC1 1216 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 FBXO36Q8NEA4 188 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 GPRC5AQ8NFJ5 357 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 PPTC7Q8NI37 304 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 WDR83Q9BRX9 315 aaKnown RBP15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 FAM49AQ9H0Q0 323 aaPredicted RBP15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 TUT1Q9H6E5 874 aaKnown RBP15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 CD248Q9HCU0 757 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 SLC12A4Q9UP95 1085 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 ACTL7BQ9Y614 415 aa15.58■□□□□ 0.09
VIPAS39-202ENST00000343765 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 CA4P22748 312 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 RPA3P35244 121 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 ZNF143P52747 638 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 RBP5P82980 135 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 GLRA4Q5JXX5 417 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 C3orf62Q6ZUJ4 267 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 ACOT1Q86TX2 421 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 CCDC125Q86Z20 511 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 LINC01465Q8N7H1 131 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 NAT8LQ8N9F0 302 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 CMASQ8NFW8 434 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 RMDN2Q96LZ7 410 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 LPIN3Q9BQK8 851 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 C16orf70Q9BSU1 422 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 NGRNQ9NPE2 291 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 EFR3BQ9Y2G0 817 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 HES2Q9Y543 173 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 SNX9Q9Y5X1 595 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 APOC4-APOC2K7ER74 178 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 NPTXRO95502 500 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 APOC2P02655 101 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 GABRB2P47870 512 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 PCGF5Q86SE9 256 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 TBC1D1Q86TI0 1168 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 FBF1Q8TES7 1133 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 MRPL45Q9BRJ2 306 aaKnown RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 NT5C1AQ9BXI3 368 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 PITPNM3Q9BZ71 974 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 PSMC3IPQ9P2W1 217 aaPredicted RBP15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 ITGA11Q9UKX5 1188 aa15.58■□□□□ 0.08
VIPAS39-202ENST00000343765 CHMP2BQ9UQN3 213 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms