RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 LEFTY2O00292 366 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 TRAK2O60296 914 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 OPHN1O60890 802 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 PFKLP17858 780 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 ACAT1P24752 427 aaKnown RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 TIE1P35590 1138 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 EIF2DP41214 584 aaKnown RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 PNPLA4P41247 253 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 ATXN3P54252 364 aaPredicted RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 GFPT1Q06210 699 aaPredicted RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 EOGTQ5NDL2 527 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 ADALQ6DHV7 355 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 NT5DC4Q86YG4 428 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 MINDY1Q8N5J2 469 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 MYCT1Q8N699 235 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 SPATA18Q8TC71 538 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 COL26A1Q96A83 441 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 ZNF560Q96MR9 790 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 PNKPQ96T60 521 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 GTPBP2Q9BX10 602 aaKnown RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 PARVGQ9HBI0 331 aa18.12■□□□□ 0.49
TRA2B-202ENST00000342294 AGO2Q9UKV8 859 aaKnown RBP18.12■□□□□ 0.49
TRA2B-202ENST00000342294 MYMKA6NI61 221 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 KAT7O95251 611 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 PDE6CP51160 858 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 ATP2C1P98194 919 aaPredicted RBP18.11■□□□□ 0.49
TRA2B-202ENST00000342294 DHCR24Q15392 516 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 COL28A1Q2UY09 1125 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 FILIP1Q7Z7B0 1213 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 OSTM1Q86WC4 334 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 TMEM86AQ8N2M4 240 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 OR2I1PQ8NGU4 316 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 HMGB4Q8WW32 186 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 ADAMTS14Q8WXS8 1223 aa18.11■□□□□ 0.49
TRA2B-202ENST00000342294 FUBP3Q96I24 572 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRA2B-202ENST00000342294 DNAAF2Q9NVR5 837 aaKnown RBP18.11■□□□□ 0.49
TRA2B-202ENST00000342294 BCCIPQ9P287 314 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRA2B-202ENST00000342294 SETXQ7Z333 2677 aaKnown RBP18.1■□□□□ 0.49
TRA2B-202ENST00000342294 PCDH15Q96QU1 1955 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 ANAPC1Q9H1A4 1944 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 PLXND1Q9Y4D7 1925 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 ARHGAP33O14559 1287 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 GABRDO14764 452 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 AP5Z1O43299 807 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 GJB3O75712 270 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 FAM13AO94988 1023 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 MAGEA11P43364 429 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 TNFRSF4P43489 277 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 SLC7A9P82251 487 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 HMGN5P82970 282 aaKnown RBP18.1■□□□□ 0.49
TRA2B-202ENST00000342294 MYL7Q01449 175 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 SCARA3Q6AZY7 606 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 SLFN12LQ6IEE8 588 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 FAM171BQ6P995 826 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 CCNI2Q6ZMN8 369 aaPredicted RBP18.1■□□□□ 0.49
TRA2B-202ENST00000342294 GPBP1Q86WP2 473 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 C12orf40Q86WS4 652 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 SPATA2LQ8IUW3 424 aaPredicted RBP18.1■□□□□ 0.49
TRA2B-202ENST00000342294 SCN4BQ8IWT1 228 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 PHTF2Q8N3S3 785 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 CXorf38Q8TB03 319 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
TRA2B-202ENST00000342294 TCRBV21S2A2A0A5A6 115 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 HCRTO43612 131 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 HUS1O60921 280 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 IL18RAPO95256 599 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 OLFM2O95897 454 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 APODP05090 189 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 POLR2BP30876 1174 aaKnown RBP18.09■□□□□ 0.49
TRA2B-202ENST00000342294 ABCD1P33897 745 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 GRIA2P42262 883 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 WNT7BP56706 349 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 TRIP6Q15654 476 aaKnown RBP18.09■□□□□ 0.49
TRA2B-202ENST00000342294 RABEPKQ7Z6M1 372 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 CDK5RAP3Q96JB5 506 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 SPATA17Q96L03 361 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 CAMK1GQ96NX5 476 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 BBC3Q96PG8 261 aaPredicted RBP18.09■□□□□ 0.49
TRA2B-202ENST00000342294 RNF38Q9H0F5 515 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 IKZF4Q9H2S9 585 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 ST6GALNAC4Q9H4F1 302 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 ZDHHC4Q9NPG8 344 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 GDAP2Q9NXN4 497 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
TRA2B-202ENST00000342294 SLC9A3R1O14745 358 aaPredicted RBP18.08■□□□□ 0.48
TRA2B-202ENST00000342294 ADSSP30520 456 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 USP46P62068 366 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 RPL6Q02878 288 aaKnown RBP18.08■□□□□ 0.48
TRA2B-202ENST00000342294 ZNF33AQ06730 810 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 SLC14A1Q13336 389 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 SLC36A4Q6YBV0 504 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 PGBD3Q8N328 593 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 DEFB119Q8N690 84 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 LRRC52Q8N7C0 313 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 CEP295NLQ96MC4 621 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 TTLL2Q9BWV7 592 aa18.08■□□□□ 0.48
TRA2B-202ENST00000342294 CCDC86Q9H6F5 360 aaKnown RBP18.08■□□□□ 0.48
TRA2B-202ENST00000342294 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms