RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CTCFP49711 727 aaPredicted RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 KYNUQ16719 465 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 ELOA2Q8IYF1 753 aaPredicted RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 MYO1HQ8N1T3 1032 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 ACSF2Q96CM8 615 aaPredicted RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 USP31Q70CQ4 1352 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 VDRP11473 427 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 TRPM5Q9NZQ8 1165 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 TRIM10Q9UDY6 481 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 B2RBV5 119 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 PBLDP30039 288 aaPredicted RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 STIP1P31948 543 aaKnown RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 MIB1Q86YT6 1006 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 SH2D3CQ8N5H7 860 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 CNDP1Q96KN2 507 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 AGPAT3Q9NRZ7 376 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 RPS6KB2Q9UBS0 482 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 KIAA1257Q9ULG3 409 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 MSH4O15457 936 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 F9P00740 461 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 CKMP06732 381 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 GPC1P35052 558 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 RFX3P48380 749 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 FXR1P51114 621 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 EPHB3P54753 998 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 MAP3K7CLP57077 242 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 CSTF3Q12996 717 aaKnown RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 ZKSCAN4Q969J2 545 aaPredicted RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 ERP44Q9BS26 406 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 TUBE1Q9UJT0 475 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 NAMPTP43490 491 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 KLK7P49862 253 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 GJB7Q6PEY0 223 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 PCSK9Q8NBP7 692 aaKnown RBP15.78■□□□□ 0.12
COL11A2-201ENST00000341947 CERKQ8TCT0 537 aa15.78■□□□□ 0.12
COL11A2-201ENST00000341947 GRK3P35626 688 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 CLK1P49759 484 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 OR2W6PQ8NHA6 318 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 SGF29Q96ES7 293 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 FAR2Q96K12 515 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 TRIP4Q15650 581 aaPredicted RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 CAPRIN2Q6IMN6 1127 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 CCNI2Q6ZMN8 369 aaPredicted RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 THUMPD3Q9BV44 507 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 SYNCRIPO60506 623 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 ZC3H11AO75152 810 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 ERVK-10P10266 1014 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 PDK2Q15119 407 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 TRIP10Q15642 601 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 PHACTR4Q8IZ21 702 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 ARMC2Q8NEN0 867 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 CCDC126Q96EE4 140 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 MROH8Q9H579 483 aa15.77■□□□□ 0.12
COL11A2-201ENST00000341947 ZCCHC17Q9NP64 241 aaKnown RBP15.77■□□□□ 0.12
COL11A2-201ENST00000341947 ITGALP20701 1170 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 GCLCP48506 637 aaPredicted RBP15.77■□□□□ 0.11
COL11A2-201ENST00000341947 SERPINB8P50452 374 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 DEFA1P59665 94 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 DEFA3P59666 94 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 ANGPT1Q15389 498 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 hCG_2014768A0A024R1R8 64 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 TRIM49D1C9J1S8 452 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 ACOT1Q86TX2 421 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 CCT8L2Q96SF2 557 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.11
COL11A2-201ENST00000341947 FBXO21O94952 628 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ACADMP11310 421 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 MTM1Q13496 603 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ISCUQ9H1K1 167 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 PALMDQ9NP74 551 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 GTF3C4Q9UKN8 822 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 MAP3K13O43283 966 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 GLRA3O75311 464 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 SEZ6Q53EL9 994 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DENND1BQ6P3S1 775 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CCNJLQ8IV13 435 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DDI1Q8WTU0 396 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ZNF333Q96JL9 665 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CELF4Q9BZC1 486 aaKnown RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 MTMR12Q9C0I1 747 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ILKAPQ9H0C8 392 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 IMPAD1Q9NX62 359 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DCDC2Q9UHG0 476 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 SNTNA6NMZ2 147 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 M0R3G1 203 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ZBTB39O15060 712 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 RHOCP08134 193 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DAGLBQ8NCG7 672 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 IRX2Q9BZI1 471 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms