RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PATJQ8NI35 1801 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 TRAV19A0A0A6YYK7 116 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 PES1O00541 588 aaKnown RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 NRG2O14511 850 aaPredicted RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 PSMC3P17980 439 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 FCARP24071 287 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 YWHAQP27348 245 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 WEE1P30291 646 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 CACNA2D1P54289 1103 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 GCNT1Q02742 428 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 CAVIN1Q6NZI2 390 aaKnown RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 GBP6Q6ZN66 633 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 ARID3BQ8IVW6 561 aaPredicted RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 MAB21L3Q8N8X9 362 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 WHAMMQ8TF30 809 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 RPP25Q9BUL9 199 aaKnown RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 TTLL2Q9BWV7 592 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 NAT10Q9H0A0 1025 aaKnown RBP20.33■□□□□ 0.85
SYNE4-202ENST00000340477 BRD9Q9H8M2 597 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 KIF9Q9HAQ2 790 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 COMMD8Q9NX08 183 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 OBP2AQ9NY56 170 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 NFE2L3Q9Y4A8 694 aa20.33■□□□□ 0.85
SYNE4-202ENST00000340477 HEPACAM2A8MVW5 462 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 KCNJ18B7U540 433 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 CKMP06732 381 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 CD19P15391 556 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 EEF1GP26641 437 aaKnown RBP20.32■□□□□ 0.84
SYNE4-202ENST00000340477 VIPR2P41587 438 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 RAD23BP54727 409 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 MAP3K7CLP57077 242 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 KCNJ12Q14500 433 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 PAQR9Q6ZVX9 377 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 BMP8AQ7Z5Y6 402 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 MON1AQ86VX9 555 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 MFSD6LQ8IWD5 586 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 CMTM8Q8IZV2 173 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 SIX5Q8N196 739 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 ANKRD20A12PQ8NF67 263 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 ENOX1Q8TC92 643 aaKnown RBP20.32■□□□□ 0.84
SYNE4-202ENST00000340477 FBXO32Q969P5 355 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 ASIC4Q96FT7 647 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 KCNK16Q96T55 309 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 FBXO44Q9H4M3 255 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 CA14Q9ULX7 337 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 PCDHB4Q9Y5E5 795 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 MYO16Q9Y6X6 1858 aa20.32■□□□□ 0.84
SYNE4-202ENST00000340477 GTPBP10A4D1E9 387 aaKnown RBP20.31■□□□□ 0.84
SYNE4-202ENST00000340477 USP17L7P0C7H9 530 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 NPR3P17342 541 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 PFKLP17858 780 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 SLC5A3P53794 718 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 USP46P62068 366 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 GPC5P78333 572 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 GRM2Q14416 872 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 EXOC3L4Q17RC7 722 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 SGO2Q562F6 1265 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 HSP90AA4PQ58FG1 418 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 TXNDC8Q6A555 127 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 TMEM270Q6UE05 265 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 VITQ6UXI7 678 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 HFE2Q6ZVN8 426 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 ENOSF1Q7L5Y1 443 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 TMEM150AQ86TG1 271 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 IRF2BP1Q8IU81 584 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 FBXL6Q8N531 539 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 CELF5Q8N6W0 485 aaKnown RBP20.31■□□□□ 0.84
SYNE4-202ENST00000340477 SLC4A11Q8NBS3 891 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 OVCA2Q8WZ82 227 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 DNASE1L2Q92874 299 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 IRF7Q92985 503 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 JAKMIP2Q96AA8 810 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 SHDQ96IW2 340 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 TUBGCP2Q9BSJ2 902 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 SLC46A2Q9BY10 475 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 CSNK1G1Q9HCP0 422 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 PNPLA8Q9NP80 782 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 ARHGEF3Q9NR81 526 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 THG1LQ9NWX6 298 aaKnown RBP20.31■□□□□ 0.84
SYNE4-202ENST00000340477 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 HESX1Q9UBX0 185 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 KIAA1257Q9ULG3 409 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 ANAPC1Q9H1A4 1944 aa20.31■□□□□ 0.84
SYNE4-202ENST00000340477 STK25O00506 426 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 ZNF263O14978 683 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 TADA3O75528 432 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 ABL1P00519 1130 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 GDI1P31150 447 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 TAF10Q12962 218 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 PPP1R26Q5T8A7 1209 aaPredicted RBP20.3■□□□□ 0.84
SYNE4-202ENST00000340477 ARHGAP17Q68EM7 881 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 CLEC20AQ6ZU45 233 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 RRAGAQ7L523 313 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 LMO3Q8TAP4 145 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 SMOQ99835 787 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 CRACR2AQ9BSW2 395 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 DUSP16Q9BY84 665 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 PLA2G2FQ9BZM2 168 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 TMEM30AQ9NV96 361 aa20.3■□□□□ 0.84
SYNE4-202ENST00000340477 LETM1O95202 739 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms