RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 B4GALT4O60513 344 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 PLS3P13797 630 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 BGNP21810 368 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CHRNA3P32297 505 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 COILP38432 576 aaPredicted RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 RACK1P63244 317 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CENPCQ03188 943 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 KCNC4Q03721 635 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 FASTKD3Q14CZ7 662 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 NDUFA5Q16718 116 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 FAM214AQ32MH5 1076 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 PARP10Q53GL7 1025 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 AARS2Q5JTZ9 985 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 IGFN1Q86VF2 1251 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 NPLOC4Q8TAT6 608 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 TNFRSF25Q93038 417 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 CDHR1Q96JP9 859 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 FGFBP2Q9BYJ0 223 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 TRIT1Q9H3H1 467 aaKnown RBP10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 THAP1Q9NVV9 213 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 HMGXB4Q9UGU5 601 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 LGALS13Q9UHV8 139 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 COG5Q9UP83 839 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 NR2E3Q9Y5X4 410 aa10.06□□□□□ -0.8
PTCHD4-201ENST00000339488 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 GIPC1O14908 333 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BANF1O75531 89 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BBOX1O75936 387 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 PRKACAP17612 351 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 PPP2R2BQ00005 443 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 LMNB2Q03252 620 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 CENPPQ6IPU0 288 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BORAQ6PGQ7 559 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BRINP3Q76B58 766 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 USP37Q86T82 979 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 GPR180Q86V85 440 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 DDI1Q8WTU0 396 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 TTC17Q96AE7 1141 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 OTUD5Q96G74 571 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BTBD6Q96KE9 485 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 C8orf48Q96LL4 319 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 C17orf80Q9BSJ5 609 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 KLC2Q9H0B6 622 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 GANQ9H2C0 597 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 IGSF9Q9P2J2 1179 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 DIS3Q9Y2L1 958 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 SPOPO43791 374 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF182P17025 639 aaPredicted RBP10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 POLR2EP19388 210 aaKnown RBP10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 ETV3P41162 512 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 PHC1P78364 1004 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 MAPK11Q15759 364 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 PPM1LQ5SGD2 360 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 TTC23LQ6PF05 361 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 TMEM26Q6ZUK4 368 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 SNX29Q8TEQ0 813 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 BTBD9Q96Q07 612 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 TCF12Q99081 682 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC29A1Q99808 456 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF304Q9HCX3 659 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 ERGIC3Q9Y282 383 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 IFT52Q9Y366 437 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 UTYO14607 1347 aa10.05□□□□□ -0.8
PTCHD4-201ENST00000339488 A0A087WZG4 1122 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PIK3CDO00329 1044 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PODXLO00592 558 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DENRO43583 198 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 KCNH1O95259 989 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DLDP09622 509 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF23P17027 643 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GABRB3P28472 473 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 MLLT10P55197 1068 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 AMPD3Q01432 767 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 LRRC63Q05C16 580 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 C15orf59Q2T9L4 293 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 HSF5Q4G112 596 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 BTBD8Q5XKL5 378 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DTHD1Q6ZMT9 781 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ELMOD2Q8IZ81 293 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 APPL2Q8NEU8 664 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 LNX1Q8TBB1 728 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GIPC2Q8TF65 315 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 XAGE3Q8WTP9 111 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 MAP6Q96JE9 813 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 THAP2Q9H0W7 228 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 MANSC1Q9H8J5 431 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 COPS7BQ9H9Q2 264 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms