RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 ING5Q8WYH8 240 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 FGF13Q92913 245 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
SRSF3-201ENST00000339436 KCNK16Q96T55 309 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 SMOQ99835 787 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 CSNK1G1Q9HCP0 422 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 PLCB1Q9NQ66 1216 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 EPS15L1Q9UBC2 864 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 SIK3Q9Y2K2 1263 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 FHOD1Q9Y613 1164 aa13.62□□□□□ -0.23
SRSF3-201ENST00000339436 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 RNF225M0QZC1 329 aaPredicted RBP13.61□□□□□ -0.23
SRSF3-201ENST00000339436 O00370 1275 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 TADA3O75528 432 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 FGF19O95750 216 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 VDRP11473 427 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 UCHL3P15374 230 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 CD19P15391 556 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 GABRR2P28476 465 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 SSTR3P32745 418 aaPredicted RBP13.61□□□□□ -0.23
SRSF3-201ENST00000339436 KLK7P49862 253 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 UBXN1Q04323 297 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 SYCP1Q15431 976 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 ARHGAP44Q17R89 818 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 ZDHHC14Q8IZN3 488 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 GJD3Q8N144 294 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 TTLL2Q9BWV7 592 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 GANQ9H2C0 597 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 UXTQ9UBK9 157 aaPredicted RBP13.61□□□□□ -0.23
SRSF3-201ENST00000339436 DNAJC12Q9UKB3 198 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
SRSF3-201ENST00000339436 MAGED2Q9UNF1 606 aaPredicted RBP13.61□□□□□ -0.23
SRSF3-201ENST00000339436 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
SRSF3-201ENST00000339436 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 BEST1O76090 585 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 LAMP2P13473 410 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 GJA1P17302 382 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 CDC25CP30307 473 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 SLC5A3P53794 718 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 MAP3K7CLP57077 242 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 USP46P62068 366 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 RAPGEF1Q13905 1077 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 TEAD2Q15562 447 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 GOLGA7BQ2TAP0 167 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 TMEM150AQ86TG1 271 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 TFAP2BQ92481 460 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 GCNAQ96QF7 691 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 NAA15Q9BXJ9 866 aaKnown RBP13.6□□□□□ -0.23
SRSF3-201ENST00000339436 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 GPR88Q9GZN0 384 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 PNPLA8Q9NP80 782 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
SRSF3-201ENST00000339436 FAM207AQ9NSI2 230 aaPredicted RBP13.6□□□□□ -0.23
SRSF3-201ENST00000339436 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 EHD2Q9NZN4 543 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 TSPAN16Q9UKR8 245 aa13.6□□□□□ -0.23
SRSF3-201ENST00000339436 TNFRSF10BO14763 440 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 EPHB6O15197 1021 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 BRD2P25440 801 aaKnown RBP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 BCAT1P54687 386 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 POTEHQ6S545 545 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 NUP93Q8N1F7 819 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 ATXN3LQ9H3M9 355 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 DAAM1Q9Y4D1 1078 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 TECTAO75443 2155 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 HHLA1C9JL84 531 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 F8VZ95 297 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 TEX33O43247 280 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 SERPINC1P01008 464 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 CALCAP01258 141 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 F11P03951 625 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 CYP4F8P98187 520 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 STILQ15468 1287 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 FILIP1LQ4L180 1135 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 GPRIN1Q7Z2K8 1008 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
SRSF3-201ENST00000339436 SLITRK6Q9H5Y7 841 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 HESX1Q9UBX0 185 aa13.59□□□□□ -0.23
SRSF3-201ENST00000339436 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.23
SRSF3-201ENST00000339436 F5P12259 2224 aa13.58□□□□□ -0.24
SRSF3-201ENST00000339436 NCANO14594 1321 aa13.58□□□□□ -0.24
SRSF3-201ENST00000339436 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
SRSF3-201ENST00000339436 M0QYV0 167 aa13.58□□□□□ -0.24
SRSF3-201ENST00000339436 FOXN3O00409 490 aaPredicted RBP13.58□□□□□ -0.24
SRSF3-201ENST00000339436 SETSIPP0DME0 302 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms