RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 ASIC4Q96FT7 647 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 ZSWIM3Q96MP5 696 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 HNRNPABQ99729 332 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 RPP25Q9BUL9 199 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 BRD9Q9H8M2 597 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 KRT82Q9NSB4 513 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 FAM49BQ9NUQ9 324 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 THG1LQ9NWX6 298 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
SLC28A1-202ENST00000338602 HEPACAM2A8MVW5 462 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 ZNF263O14978 683 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 LRRN2O75325 713 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 TPM2P07951 284 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 USP17L7P0C7H9 530 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 PFKLP17858 780 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 ADORA2BP29275 332 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 GPC5P78333 572 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 STX1AQ16623 288 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 GBP6Q6ZN66 633 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 HFE2Q6ZVN8 426 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 CMTM8Q8IZV2 173 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 SIX5Q8N196 739 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 FBXL6Q8N531 539 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 CELF5Q8N6W0 485 aaKnown RBP12□□□□□ -0.49
SLC28A1-202ENST00000338602 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 STKLD1Q8NE28 680 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 WHAMMQ8TF30 809 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 TWNKQ96RR1 684 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 TTLL2Q9BWV7 592 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC46A2Q9BY10 475 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 SMOC2Q9H3U7 446 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 FBXO44Q9H4M3 255 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 TRPC7Q9HCX4 862 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 HMGXB4Q9UGU5 601 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 KIAA1257Q9ULG3 409 aa12□□□□□ -0.49
SLC28A1-202ENST00000338602 USP34Q70CQ2 3546 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 TRAV19A0A0A6YYK7 116 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 ABL1P00519 1130 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 CKMP06732 381 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 FCARP24071 287 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 GDI1P31150 447 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 VIPR2P41587 438 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 IFRD2Q12894 506 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 MAN2A1Q16706 1144 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 TXNDC8Q6A555 127 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 VITQ6UXI7 678 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 PAQR9Q6ZVX9 377 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 FLCNQ8NFG4 579 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 ENOX1Q8TC92 643 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 OVCA2Q8WZ82 227 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 DNASE1L2Q92874 299 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 FBXO32Q969P5 355 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 KCNK16Q96T55 309 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 ARID3AQ99856 593 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 PLA2G2FQ9BZM2 168 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 NAT10Q9H0A0 1025 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 INTS2Q9H0H0 1204 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 CSNK1G1Q9HCP0 422 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 PNPLA8Q9NP80 782 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 ARHGEF3Q9NR81 526 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 TDP1Q9NUW8 608 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 GCNT4Q9P109 453 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 CA14Q9ULX7 337 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
SLC28A1-202ENST00000338602 GTPBP10A4D1E9 387 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 PES1O00541 588 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 CHADO15335 359 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 TECTAO75443 2155 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 PAEPP09466 180 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 VDRP11473 427 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 CD19P15391 556 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 NPR3P17342 541 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 HDCP19113 662 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 EEF1GP26641 437 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC5A3P53794 718 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 CACNA2D1P54289 1103 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 RAD23BP54727 409 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 GCNT1Q02742 428 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 PRKCQQ04759 706 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 TAF10Q12962 218 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 GRM2Q14416 872 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 ZNF268Q14587 947 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 ARHGAP29Q52LW3 1261 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC44A4Q53GD3 710 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 SGO2Q562F6 1265 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 ARHGAP17Q68EM7 881 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 CC2D1AQ6P1N0 951 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 TMEM150AQ86TG1 271 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 ANKRD20A12PQ8NF67 263 aa11.98□□□□□ -0.49
SLC28A1-202ENST00000338602 BPIFB1Q8TDL5 484 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms