RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 USP18Q9UMW8 372 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 UMODL1Q5DID0 1318 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 KIF3CO14782 793 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 MLH1P40692 756 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 C4orf22Q6V702 233 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 MFN1Q8IWA4 741 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SLC2A14Q8TDB8 520 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 CAPNS2Q96L46 248 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 FBXO44Q9H4M3 255 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 CPSF2Q9P2I0 782 aaKnown RBP15.62■□□□□ 0.09
C9orf47-201ENST00000334490 PKP3Q9Y446 797 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 SMAPO00193 183 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ANP32DO95626 131 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 WEE1P30291 646 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ZNF200P98182 395 aaPredicted RBP15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ADIGQ0VDE8 80 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 FOXD4Q12950 439 aaPredicted RBP15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ELMO2Q96JJ3 720 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 LACRTQ9GZZ8 138 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 Q9H521 79 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 CHST12Q9NRB3 414 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 VPS28Q9UK41 221 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 ADAM21Q9UKJ8 722 aa15.62■□□□□ 0.09
C9orf47-201ENST00000334490 PRR23AA6NEV1 266 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 PROSCO94903 275 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 ZBTB48P10074 688 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 MAGEA4P43358 317 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 CASP5P51878 434 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 MORF4L2Q15014 288 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 DNAAF5Q86Y56 855 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 DDIASQ8IXT1 998 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 ATG4AQ8WYN0 398 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TSPAN17Q96FV3 270 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TGS1Q96RS0 853 aaKnown RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 SMPD4Q9NXE4 827 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 ZRANB3Q5FWF4 1079 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TFDP3Q5H9I0 405 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 GLIS3Q8NEA6 775 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 INPP4AQ96PE3 977 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 HSD17B14Q9BPX1 270 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 CIPCQ9C0C6 399 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TNFSF13BQ9Y275 285 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 CAPN6Q9Y6Q1 641 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 IFT172Q9UG01 1749 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 KCNA2P16389 499 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 OXCT1P55809 520 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 CAPSQ13938 189 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 DUSP28Q4G0W2 176 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 ETNPPLQ8TBG4 499 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 SMARCD1Q96GM5 515 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 SPRP35270 261 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 ZNF280AP59817 542 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 BEND6Q5SZJ8 279 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TRIM68Q6AZZ1 485 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 PPIL6Q8IXY8 311 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 CENPKQ9BS16 269 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 TSSK1BQ9BXA7 367 aa15.61■□□□□ 0.09
C9orf47-201ENST00000334490 DMAP1Q9NPF5 467 aaPredicted RBP15.61■□□□□ 0.09
C9orf47-201ENST00000334490 SNHG28P0DPA3 235 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 ITGB3BPQ13352 177 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 RBBP7Q16576 425 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 LONRF1Q17RB8 773 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 HSDL1Q3SXM5 330 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 TMEM161BQ8NDZ6 487 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 BLOC1S5Q8TDH9 187 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 COL14A1Q05707 1796 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 PEX10O60683 326 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 MYO1DO94832 1006 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 RHOCP08134 193 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 YWHAZP63104 245 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 COL9A3Q14050 684 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CCNI2Q6ZMN8 369 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 LINC00523Q86TU6 105 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 FUCA2Q9BTY2 467 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 UPF3AQ9H1J1 476 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SYNDIG1Q9H7V2 258 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 TRIM33Q9UPN9 1127 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 PYGLP06737 847 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SERPINB9P50453 376 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 ARFIP2P53365 341 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 GTF2BQ00403 316 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 MDM2Q00987 491 aaPredicted RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 HS6ST3Q8IZP7 471 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 RUBCNQ92622 972 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CRLS1Q9UJA2 301 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SPAG6O75602 509 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 YWHAQP27348 245 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CCR1P32246 355 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CARSP49589 748 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 OTUD4Q01804 1114 aaKnown RBP15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CBWD6Q4V339 395 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SLC39A12Q504Y0 691 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CBWD3Q5JTY5 395 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 CBWD5Q5RIA9 395 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 ADCK2Q7Z695 626 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 EMILIN2Q9BXX0 1053 aa15.6■□□□□ 0.09
C9orf47-201ENST00000334490 SLC7A5P2Q9GIP4 190 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms