RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 RABGGTBP53611 331 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 HADHBP55084 474 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SLC18A3Q16572 532 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MGAT5BQ3V5L5 792 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 MSANTD2Q6P1R3 559 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 DENND5BQ6ZUT9 1274 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 OSTM1Q86WC4 334 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC117Q8IWD4 279 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 UNC45BQ8IWX7 931 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SUGP1Q8IWZ8 645 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 RNF10Q8N5U6 811 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 EPS8L1Q8TE68 723 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 DEPDC1BQ8WUY9 529 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PSMG2Q969U7 264 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 AZIN2Q96A70 460 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 PLD4Q96BZ4 506 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 C18orf8Q96DM3 657 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 NAP1L5Q96NT1 182 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 ALS2CR12Q96Q35 445 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 SLC4A5Q9BY07 1137 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TBC1D14Q9P2M4 693 aa5.45□□□□□ -1.54
LRIT3-201ENST00000327908 COL4A4P53420 1690 aaPredicted RBP5.45□□□□□ -1.54
LRIT3-201ENST00000327908 TRAV19A0A0A6YYK7 116 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TYW5A2RUC4 315 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 LRRC53A6NM62 1247 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 KRT86O43790 486 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CYP1A1P04798 512 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 C8AP07357 584 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 FOSL2P15408 326 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CLCN4P51793 760 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GUCY2FP51841 1108 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 COG7P83436 770 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 LRMPQ12912 555 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ADAM15Q13444 863 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TUBB2AQ13885 445 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ARL13BQ3SXY8 428 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 BRMS1LQ5PSV4 323 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TTC39BQ5VTQ0 682 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 DNAJC24Q6P3W2 148 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 NUDT18Q6ZVK8 323 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 PDZD4Q76G19 769 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ACOT1Q86TX2 421 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 VSIG1Q86XK7 387 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SERPINB11Q96P15 392 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CLSTN3Q9BQT9 956 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TUBB2BQ9BVA1 445 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 OSBPL7Q9BZF2 842 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GOLGA2P5Q9HBQ8 144 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 NLRC4Q9NPP4 1024 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ABI2Q9NYB9 513 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TSPAN16Q9UKR8 245 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CXorf51AA0A1B0GTR3 108 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 FAM92AA1XBS5 289 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SLC38A8A6NNN8 435 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 FOXN3O00409 490 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 DPYSL4O14531 572 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SPTLC1O15269 473 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GRM6O15303 877 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 MTA2O94776 668 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 LCA5LO95447 670 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GYPCP04921 128 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CNPP09543 421 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CCDC175P0C221 793 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 HADHQ16836 314 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 RTP2Q5QGT7 225 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SLC26A9Q7LBE3 791 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GPR149Q86SP6 731 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 KIAA1328Q86T90 577 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TMEM110Q86TL2 294 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 FBXO32Q969P5 355 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 PDLIM2Q96JY6 352 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 PPP1R13BQ96KQ4 1090 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 PI4K2AQ9BTU6 479 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SELENOOQ9BVL4 669 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 B3GNT5Q9BYG0 378 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ADAM7Q9H2U9 754 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 MAN1C1Q9NR34 630 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 IP6K2Q9UHH9 426 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CYP26A1O43174 497 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TEX33O43247 280 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 CASP14P31944 242 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 MLLT6P55198 1093 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 GPC5P78333 572 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 NR1H3Q13133 447 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 PIGHQ14442 188 aaPredicted RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 LEXMQ3ZCV2 418 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 RAB41Q5JT25 222 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 BTBD8Q5XKL5 378 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 NUGGCQ68CJ6 796 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SCN4BQ8IWT1 228 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 C3orf20Q8ND61 904 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 C3orf58Q8NDZ4 430 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 ZSWIM2Q8NEG5 633 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 MAIP1Q8WWC4 291 aa5.44□□□□□ -1.54
LRIT3-201ENST00000327908 SMG7Q92540 1137 aaKnown RBP5.44□□□□□ -1.54
LRIT3-201ENST00000327908 TBCBQ99426 244 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms