RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZNF365Q70YC5 407 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 ERICH1Q86X53 443 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 MYCBPAPQ8TBZ2 947 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CPXM1Q96SM3 734 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-202ENST00000324340 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 NUP85Q9BW27 656 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 CTTNBP2NLQ9P2B4 639 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 SUFUQ9UMX1 484 aa13.45□□□□□ -0.26
DDX39A-202ENST00000324340 VWA8A3KMH1 1905 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■■ 49.9
DDX39A-202ENST00000324340 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 FGFR3P22607 806 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 EPHB4P54760 987 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 MAMLD1Q13495 774 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 TMEM240Q5SV17 173 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 PAPD7Q5XG87 772 aaKnown RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 C11orf63Q6NUN7 778 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 OTOP2Q7RTS6 562 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 CCDC50Q8IVM0 306 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 SYCE1Q8N0S2 351 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 OR10T2Q8NGX3 314 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 UBA3Q8TBC4 463 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 ZNF564Q8TBZ8 553 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 MAGEC3Q8TD91 643 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 CABS1Q96KC9 395 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 PNKPQ96T60 521 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 B3GNT5Q9BYG0 378 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 GPR62Q9BZJ7 368 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 MIS12Q9H081 205 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 MRPL47Q9HD33 250 aaKnown RBP13.44□□□□□ -0.26
DDX39A-202ENST00000324340 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 SCINQ9Y6U3 715 aa13.44□□□□□ -0.26
DDX39A-202ENST00000324340 NLRC5Q86WI3 1866 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MYH10P35580 1976 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 FAM170AA1A519 330 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MYBPHLA2RUH7 354 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 GOLGA8KD6RF30 607 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 CHUKO15111 745 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 ERBB2P04626 1255 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 ADORA2BP29275 332 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 ALDH7A1P49419 539 aaKnown RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MNAT1P51948 309 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 AMPD2Q01433 879 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 ZNF268Q14587 947 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 C2CD6Q53TS8 623 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MDH1BQ5I0G3 518 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 PMF1Q6P1K2 205 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 FOXR1Q6PIV2 292 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 TMCO2Q7Z6W1 182 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 TMEM110Q86TL2 294 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 TAX1BP1Q86VP1 789 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 FAM76AQ8TAV0 307 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-202ENST00000324340 HERVK_113Q902F9 699 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.261e-9■■□□□ 11.7
DDX39A-202ENST00000324340 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 PARVAQ9NVD7 372 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 FAM169AQ9Y6X4 670 aa13.43□□□□□ -0.26
DDX39A-202ENST00000324340 PTPRDP23468 1912 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 PPP1R12AO14974 1030 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 XPO1O14980 1071 aaKnown RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 GABBR2O75899 941 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 GJB5O95377 273 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 SYF2O95926 243 aaKnown RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 ATP1A1P05023 1023 aaKnown RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 PRLRP16471 622 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 NPR3P17342 541 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 LAG3P18627 525 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 SNX16P57768 344 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 VSNL1P62760 191 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 SKOR1P84550 965 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 TAP1Q03518 808 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 CKAP4Q07065 602 aaKnown RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 BTG3Q14201 252 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-202ENST00000324340 CCDC142Q17RM4 750 aa13.42□□□□□ -0.26
DDX39A-202ENST00000324340 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms