RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 CFAP221Q4G0U5 840 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 RILPL1Q5EBL4 403 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 LYSMD4Q5XG99 296 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 SLC23A3Q6PIS1 610 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 FILIP1Q7Z7B0 1213 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 CHCHD4Q8N4Q1 142 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 C1orf127Q8N9H9 656 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 ZSWIM2Q8NEG5 633 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 HMGB4Q8WW32 186 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 POMGNT1Q8WZA1 660 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 GTPBP2Q9BX10 602 aaKnown RBP21■□□□□ 0.95
SSNA1-201ENST00000322310 PILRBQ9UKJ0 227 aa21■□□□□ 0.95
SSNA1-201ENST00000322310 HELZP42694 1942 aaKnown RBP21■□□□□ 0.95
SSNA1-201ENST00000322310 IL18RAPO95256 599 aa20.99■□□□□ 0.95
SSNA1-201ENST00000322310 C12orf40Q86WS4 652 aa20.99■□□□□ 0.95
SSNA1-201ENST00000322310 TMEM86AQ8N2M4 240 aa20.99■□□□□ 0.95
SSNA1-201ENST00000322310 MYMKA6NI61 221 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ADAM23O75077 832 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ATP2C2O75185 946 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 PLCG1P19174 1290 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ATXN3P54252 364 aaPredicted RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 USP46P62068 366 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 POU5F1Q01860 360 aaKnown RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 DHCR24Q15392 516 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ARL6IP4Q66PJ3 421 aaKnown RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 LMBRD2Q68DH5 695 aaPredicted RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 NT5DC4Q86YG4 428 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ADGRF2Q8IZF7 708 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ADGRG2Q8IZP9 1017 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 PGBD3Q8N328 593 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 DEFB119Q8N690 84 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 OR2I1PQ8NGU4 316 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 SPATA18Q8TC71 538 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 RAD54LQ92698 747 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 CALML4Q96GE6 196 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 FUBP3Q96I24 572 aaKnown RBP eCLIP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 ZSCAN31Q96LW9 406 aaPredicted RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 PNKPQ96T60 521 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 FAM213AQ9BRX8 229 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 POLMQ9NP87 494 aaPredicted RBP20.98■□□□□ 0.95
SSNA1-201ENST00000322310 SNX9Q9Y5X1 595 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 LOC400499M0QZD8 3231 aa20.98■□□□□ 0.95
SSNA1-201ENST00000322310 TCRBV21S2A2A0A5A6 115 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 UPK3BL1B0FP48 263 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 UPK3BL2E5RIL1 263 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 KAT7O95251 611 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 SEC24BO95487 1268 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 ABCD1P33897 745 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 UBA7P41226 1012 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 KIR2DL1P43626 348 aaPredicted RBP20.97■□□□□ 0.95
SSNA1-201ENST00000322310 PSMC1P62191 440 aaKnown RBP20.97■□□□□ 0.95
SSNA1-201ENST00000322310 KDSRQ06136 332 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 PEAR1Q5VY43 1037 aaPredicted RBP20.97■□□□□ 0.95
SSNA1-201ENST00000322310 PROSER1Q86XN7 944 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 HDDC3Q8N4P3 179 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 CSGALNACT2Q8N6G5 542 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 CXorf38Q8TB03 319 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 SAAL1Q96ER3 474 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 RNF38Q9H0F5 515 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 SMPD4Q9NXE4 827 aa20.97■□□□□ 0.95
SSNA1-201ENST00000322310 PCNX2A6NKB5 2137 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 GABRDO14764 452 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 CAPNS1P04632 268 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 APODP05090 189 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 PCSK1P29120 753 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 MAGEA11P43364 429 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 PDE6CP51160 858 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 KCNA1Q09470 495 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 RESTQ13127 1097 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 EOGTQ5NDL2 527 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 C19orf48Q6RUI8 117 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 LRRC52Q8N7C0 313 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 AK8Q96MA6 479 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 ST6GALNAC4Q9H4F1 302 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 GDAP2Q9NXN4 497 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 TRPM5Q9NZQ8 1165 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 SLC6A14Q9UN76 642 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 CPQQ9Y646 472 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 ADAMTS9Q9P2N4 1935 aa20.96■□□□□ 0.95
SSNA1-201ENST00000322310 FAM221BA6H8Z2 402 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 H0Y626 953 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 TRIM16O95361 564 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 KRT19P08727 400 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 BDNFP23560 247 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 LHX1P48742 406 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 GFPT1Q06210 699 aaPredicted RBP20.95■□□□□ 0.94
SSNA1-201ENST00000322310 DUOXA1Q1HG43 343 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 SOWAHAQ2M3V2 549 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 HSF5Q4G112 596 aaPredicted RBP20.95■□□□□ 0.94
SSNA1-201ENST00000322310 SPDYCQ5MJ68 293 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 FAM171BQ6P995 826 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 RHBDF2Q6PJF5 856 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 ZNF720Q7Z2F6 126 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 SFR1Q86XK3 245 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 BRSK2Q8IWQ3 736 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 MINDY1Q8N5J2 469 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 MYLPFQ96A32 169 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 ARHGEF4Q9NR80 690 aa20.95■□□□□ 0.94
SSNA1-201ENST00000322310 GON4LQ3T8J9 2241 aa20.94■□□□□ 0.94
SSNA1-201ENST00000322310 SLC26A4O43511 780 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms