RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TAF5Q15542 800 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 SPATA2LQ8IUW3 424 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 MYCBPAPQ8TBZ2 947 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 KRT82Q9NSB4 513 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 CCDC160A6NGH7 325 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 GOLGA8TH3BQL2 631 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 GIPC1O14908 333 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 STRNO43815 780 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 PMPCBO75439 489 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 CD4P01730 458 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 RARGP13631 454 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 MLH1P40692 756 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 MFSD10Q14728 455 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 TFAP2BQ92481 460 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 SEC16BQ96JE7 1060 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 MFSD14AQ96MC6 490 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 GLT1D1Q96MS3 346 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 ATXN3LQ9H3M9 355 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 TMBIM4Q9HC24 238 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 MYH6P13533 1939 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 KAT6AQ92794 2004 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 SLC39A4Q6P5W5 647 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 TRMT10CQ7L0Y3 403 aaKnown RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 GDF3Q9NR23 364 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 ZMYM2Q9UBW7 1377 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 EEF2KO00418 725 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 KRT38O76015 456 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 AGTP01019 485 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 RGS2P41220 211 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 PTK7Q13308 1070 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 STAT4Q14765 748 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 FSCN1Q16658 493 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 PTPN20Q4JDL3 420 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 ZC3H12AQ5D1E8 599 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 WSCD1Q658N2 575 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SLC27A1Q6PCB7 646 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SLC25A41Q8N5S1 370 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 IPMKQ8NFU5 416 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 EXD1Q8NHP7 514 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CCT6BQ92526 530 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 RMDN2Q96LZ7 410 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CPXM1Q96SM3 734 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CYTH2Q99418 400 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CCDC68Q9H2F9 335 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SARS2Q9NP81 518 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 MYPNQ86TC9 1320 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 H3BRJ5 948 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 TREHO43280 583 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CIB2O75838 187 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CHRNB2P17787 502 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SCNN1GP51170 649 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 TKTL1P51854 596 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 EML3Q32P44 896 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 LVRNQ6Q4G3 990 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 LRRC57Q8N9N7 239 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SGF29Q96ES7 293 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 TUBGCP4Q9UGJ1 667 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 NR2E3Q9Y5X4 410 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 THP07101 528 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 TCF4P15884 667 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 ELF1P32519 619 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 CPA2P48052 419 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 JAM2P57087 298 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 HABP4Q5JVS0 413 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 NUDCD3Q8IVD9 361 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
TOP3A-201ENST00000321105 LRRC37BQ96QE4 947 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 KIF9Q9HAQ2 790 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 HAUS2Q9NVX0 235 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 NAALADL1Q9UQQ1 740 aa11.47□□□□□ -0.57
TOP3A-201ENST00000321105 SPTLC1O15269 473 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 MEFVO15553 781 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 DIAPH2O60879 1101 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 ELNP15502 786 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 TPH1P17752 444 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 EPHB1P54762 984 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 RPS6KA2Q15349 733 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 C1orf127Q8N9H9 656 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 CCDC124Q96CT7 223 aaKnown RBP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 TTC25Q96NG3 672 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 CYP4F11Q9HBI6 524 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
TOP3A-201ENST00000321105 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.57
TOP3A-201ENST00000321105 NFASCO94856 1347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms