RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 DSTNP60981 165 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 BTKQ06187 659 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 KCNA1Q09470 495 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 DLG1Q12959 904 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 MOGSQ13724 837 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 DPYSQ14117 519 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 Q3C1V9 767 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 CCDC58Q4VC31 144 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 ZNF746Q6NUN9 644 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-201ENST00000316433 RWDD4Q6NW29 188 aaKnown RBP6.94□□□□□ -1.3
ZNF540-201ENST00000316433 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 BRSK2Q8IWQ3 736 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 LILRB2Q8N423 598 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 TBCKQ8TEA7 893 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 DDI1Q8WTU0 396 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 PLEKHA8Q96JA3 519 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 CCDC138Q96M89 665 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 CIB1Q99828 191 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 DHRS9Q9BPW9 319 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 AIFM2Q9BRQ8 373 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 RNF38Q9H0F5 515 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 MARCH7Q9H992 704 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 FANCEQ9HB96 536 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 BMP2KQ9NSY1 1161 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-201ENST00000316433 AMACRQ9UHK6 382 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 ATPIF1Q9UII2 106 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 PACSIN2Q9UNF0 486 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-201ENST00000316433 GPSM3Q9Y4H4 160 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.94□□□□□ -1.3
ZNF540-201ENST00000316433 ZMYM2Q9UBW7 1377 aa6.94□□□□□ -1.3
ZNF540-201ENST00000316433 ADGRA3Q8IWK6 1321 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 MYH11P35749 1972 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SYCE1LA8MT33 242 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ESRRBO95718 433 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 BAG2O95816 211 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 GH1P01241 217 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SLC1A1P43005 524 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CDK8P49336 464 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 POLR2FP61218 127 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 XIAPP98170 497 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 STK11Q15831 433 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 KNOP1Q1ED39 458 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SFT2D3Q587I9 215 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 DRICH1Q6PGQ1 229 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 RHBDF2Q6PJF5 856 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CADM3Q8N126 398 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 RNF169Q8NCN4 708 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CABLES1Q8TDN4 633 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SGCDQ92629 289 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 GLMNQ92990 594 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ERLEC1Q96DZ1 483 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ACAP3Q96P50 834 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SERPINB12Q96P63 405 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CYTH2Q99418 400 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 AP1M1Q9BXS5 423 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 TRIM55Q9BYV6 548 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 LRRC19Q9H756 370 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 KCNK9Q9NPC2 374 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 MAP3K20Q9NYL2 800 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 GPRC5DQ9NZD1 345 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 POU2F3Q9UKI9 436 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 DSEQ9UL01 958 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 TMCC3Q9ULS5 477 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 NIP7Q9Y221 180 aaKnown RBP eCLIP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 NOSIPQ9Y314 301 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ADAMTSL1Q8N6G6 1762 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 A6NL46 340 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 SNTNA6NMZ2 147 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 GOLGA8MH3BSY2 632 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 TXNDC9O14530 226 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ENPP3O14638 875 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ZBTB5O15062 677 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ITM2AO43736 263 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PHF2O75151 1096 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CSDE1O75534 798 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 USP1O94782 785 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 FCER1AP12319 257 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 P4HA1P13674 534 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ATP6V1B1P15313 513 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 UCHL3P15374 230 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 KLRC1P26715 233 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PON1P27169 355 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ATP5DP30049 168 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 NAPAP54920 295 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 C21orf59P57076 290 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 CHRNEQ04844 493 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 NR1H3Q13133 447 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 GRIK5Q16478 980 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 INSCQ1MX18 579 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 EGFLAMQ63HQ2 1017 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 STON2Q8WXE9 905 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 ART4Q93070 314 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PGBD4Q96DM1 585 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 FAR2Q96K12 515 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PCMTD1Q96MG8 357 aaPredicted RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 OLFM1Q99784 485 aa6.93□□□□□ -1.3
ZNF540-201ENST00000316433 MRPL9Q9BYD2 267 aaKnown RBP6.93□□□□□ -1.3
ZNF540-201ENST00000316433 PAIP1Q9H074 479 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms