RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 HS6ST1O60243 411 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 OXNAD1Q96HP4 312 aaPredicted RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 PLEKHA5Q9HAU0 1116 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 RGS7P49802 495 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 TMEM110Q86TL2 294 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 S100A6P06703 90 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ABCB1P08183 1280 aaPredicted RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 FAM153BP0C7A2 387 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 HK2P52789 917 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 C1DQ13901 141 aaKnown RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 FAM153CQ494X1 144 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 SRPK1Q96SB4 655 aaKnown RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 RBBP8Q99708 897 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 SPATA16Q9BXB7 569 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 PMF1-BGLAPU3KQ54 211 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 EVPLLA8MZ36 301 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 CDK8P49336 464 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 MAPK7Q13164 816 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ANKS3Q6ZW76 656 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 KIAA1683Q9H0B3 1180 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 COPS7BQ9H9Q2 264 aaPredicted RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 MAPKAPK2P49137 400 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 CHN2P52757 468 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 SEMA3FQ13275 785 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 PDPK2PQ6A1A2 396 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 TRPC5OSA6NMA1 111 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 AKT1P31749 480 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 RALGDSQ12967 914 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 C8orf4Q9NR00 106 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 NDUFS3O75489 264 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 GLI1P08151 1106 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 BMP3P12645 472 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 KRT20P35900 424 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 C2CD6Q53TS8 623 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 SEL1L3Q68CR1 1132 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 PABPC3Q9H361 631 aaKnown RBP9.04□□□□□ -0.96
USF3-201ENST00000316407 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ANKARQ7Z5J8 1434 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ZNF518AQ6AHZ1 1483 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 PDE8BO95263 885 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 SRGNP10124 158 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 FMO5P49326 533 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 IQSEC1Q6DN90 963 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 C16orf62Q7Z3J2 963 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 GIPC3Q8TF64 312 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ANKS1AQ92625 1134 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 CCDC28BQ9BUN5 200 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 RNF112Q9ULX5 631 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 ZBTB1Q9Y2K1 713 aa9.04□□□□□ -0.96
USF3-201ENST00000316407 MAGI2Q86UL8 1455 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 TK2O00142 265 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 O00370 1275 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 CNOT3O75175 753 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 TWF2Q6IBS0 349 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 TSPAN14Q8NG11 270 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 RNF145Q96MT1 663 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 CTNNAL1Q9UBT7 734 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 CROCCP3Q8IVE0 287 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 PPIL6Q8IXY8 311 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 IL17REQ8NFR9 667 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 KLHL32Q96NJ5 620 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 RUVBL2Q9Y230 463 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 DNAJC16Q9Y2G8 782 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 KDM6BO15054 1643 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 PKNOX1P55347 436 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 KCNJ2P63252 427 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 EML3Q32P44 896 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 ATP6AP1LQ52LC2 224 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 PGBD2Q6P3X8 592 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 TADA1Q96BN2 335 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 TNRQ92752 1358 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 EIF2S1P05198 315 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 FAM83EQ2M2I3 478 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 AGKQ53H12 422 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 FUKQ8N0W3 1084 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 FBXO36Q8NEA4 188 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 GPRASP2Q96D09 838 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 APOL4Q9BPW4 351 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 MCUBQ9NWR8 336 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 SLC5A4Q9NY91 659 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 KLHL3Q9UH77 587 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 A0A1W2PRG6 482 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 DGUOKQ16854 277 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 FRMD5Q7Z6J6 570 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 SLC13A5Q86YT5 568 aaPredicted RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 BHLHE22Q8NFJ8 381 aaPredicted RBP9.03□□□□□ -0.96
USF3-201ENST00000316407 AS3MTQ9HBK9 375 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 EPB42P16452 691 aa9.03□□□□□ -0.96
USF3-201ENST00000316407 SPRP35270 261 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms