RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 THEM5Q8N1Q8 247 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 NTPCRQ9BSD7 190 aaKnown RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 FRMD8P1Q9BZ68 369 aaPredicted RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 NOP53Q9NZM5 478 aaKnown RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 ATP9BO43861 1147 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 SPAG6O75602 509 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 MOCS2O96007 188 aaPredicted RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 PAEPP09466 180 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 CHKAP35790 457 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 PLEKHH3Q7Z736 793 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 ART4Q93070 314 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 SLITRK1Q96PX8 696 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 UBN1Q9NPG3 1134 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 ITGA11Q9UKX5 1188 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 NUDT17P0C025 328 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 GCLCP48506 637 aaPredicted RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 CCDC97Q96F63 343 aaPredicted RBP13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 CXorf56Q9H5V9 222 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 YY1AP1Q9H869 796 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 RNF19AQ9NV58 838 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 PCMTD2Q9NV79 361 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 STXBP5LQ9Y2K9 1186 aa13.99□□□□□ -0.17
PCDHB9-201ENST00000316105 CST3P01034 146 aaPredicted RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 AUHQ13825 339 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 EFHC1Q5JVL4 640 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 TTC27Q6P3X3 843 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 SLC7A14Q8TBB6 771 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 BTBD7Q9P203 1132 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 HSPA4LO95757 839 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 HNRNPH1P31943 449 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 RBBP5Q15291 538 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 RASSF3Q86WH2 238 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 PLEKHO2Q8TD55 490 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 PAFAH2Q99487 392 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 KATNAL1Q9BW62 490 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 PLEKHA5Q9HAU0 1116 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 SLC12A6Q9UHW9 1150 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 TNFSF13BQ9Y275 285 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 COQ4Q9Y3A0 265 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 E5RJQ4 531 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 ZWINTO95229 277 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 SNRPAP09012 282 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 SSTR1P30872 391 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 SCTRP47872 440 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 PPM1FP49593 454 aaPredicted RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 MAP1SQ66K74 1059 aaPredicted RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 FAM131BQ86XD5 332 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 FBXO41Q8TF61 875 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 FIS1Q9Y3D6 152 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 MAFBQ9Y5Q3 323 aaPredicted RBP13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 ADGRA3Q8IWK6 1321 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 DOCK2Q92608 1830 aa13.98□□□□□ -0.17
PCDHB9-201ENST00000316105 CCDC160A6NGH7 325 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 EEF2KO00418 725 aaKnown RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PNPLA4P41247 253 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PDK2Q15119 407 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PLPPR4Q7Z2D5 763 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 LRRC6Q86X45 466 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PPP1R13LQ8WUF5 828 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 VTA1Q9NP79 307 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PDGFCQ9NRA1 345 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 MARCOQ9UEW3 520 aaPredicted RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 IPO11Q9UI26 975 aaKnown RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 ARAP2Q8WZ64 1704 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 AKAP5P24588 427 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 ARL2P36404 184 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 TAF11Q15544 211 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 GNASQ5JWF2 1037 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 KIAA0319LQ8IZA0 1049 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 BORCS6Q96GS4 357 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 MAGEB18Q96M61 343 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 EPAS1Q99814 870 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PHTF1Q9UMS5 762 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 MX2P20592 715 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 HUNKP57058 714 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 COG7P83436 770 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 OVGP1Q12889 678 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 PPIL2Q13356 520 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 FSD1LQ9BXM9 530 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 LIASO43766 372 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 SLC4A1P02730 911 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 GSTA1P08263 222 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 GSTA2P09210 222 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 MMP8P22894 467 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 SERPINB6P35237 376 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 BCAT1P54687 386 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 ITIH4Q14624 930 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 TAF1BQ53T94 588 aaPredicted RBP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 MROH9Q5TGP6 573 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms