RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 XPO1O14980 1071 aaKnown RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 THAP12O43422 761 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 MBTPS2O43462 519 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CYP11B1P15538 503 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CDC25CP30307 473 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CLCN1P35523 988 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 KRT9P35527 623 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 MRPS5P82675 430 aaKnown RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 DDR2Q16832 855 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 GOLGA7BQ2TAP0 167 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 PDZD4Q76G19 769 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 VSTM4Q8IW00 320 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 STK32AQ8WU08 396 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 OVCA2Q8WZ82 227 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 NOX5Q96PH1 765 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 LHX5Q9H2C1 402 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CYLDQ9NQC7 956 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CAPN11Q9UMQ6 739 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 LUC7L2Q9Y383 392 aaKnown RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 USP15Q9Y4E8 981 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 ZFP37Q9Y6Q3 630 aaPredicted RBP18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 CLUHO75153 1309 aa18.93■□□□□ 0.62
SSSCA1-201ENST00000309328 M0QYV0 167 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 BRD2P25440 801 aaKnown RBP18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 PLA2G4AP47712 749 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 MAP3K7CLP57077 242 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 ZBED6P86452 979 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 SMAD2Q15796 467 aaKnown RBP18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 PTCRAQ6ISU1 281 aaPredicted RBP18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 PDZD8Q8NEN9 1154 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 TFAP2BQ92481 460 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 HSFY1Q96LI6 401 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 SLITRK1Q96PX8 696 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 SMOQ99835 787 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 LPIN3Q9BQK8 851 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 TTLL2Q9BWV7 592 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 USTQ9Y2C2 406 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 BZW2Q9Y6E2 419 aaKnown RBP18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 PLXNA3P51805 1871 aa18.92■□□□□ 0.62
SSSCA1-201ENST00000309328 GRXCR2A6NFK2 248 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 SLC38A8A6NNN8 435 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 SOAT2O75908 522 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 GFPT2O94808 682 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 LSM8O95777 96 aaKnown RBP18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 RHOP08100 348 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 PKDCCQ504Y2 493 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 SFMBT2Q5VUG0 894 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 PPP1R2P3Q6NXS1 205 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 TRIM72Q6ZMU5 477 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 GRASPQ7Z6J2 395 aaPredicted RBP18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 SLC47A2Q86VL8 602 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 EPS8L1Q8TE68 723 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 KCTD13Q8WZ19 329 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 BAP1Q92560 729 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 CORO1BQ9BR76 489 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 MIS12Q9H081 205 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 PDCL3Q9H2J4 239 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 AIPL1Q9NZN9 384 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 DNMT3BQ9UBC3 853 aaKnown RBP18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 PRKAG3Q9UGI9 489 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 NR2E1Q9Y466 385 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 MTCL1Q9Y4B5 1905 aaKnown RBP18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 NCANO14594 1321 aa18.91■□□□□ 0.62
SSSCA1-201ENST00000309328 PFKLP17858 780 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 FSHRP23945 695 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 DDX6P26196 483 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 ACADSBP45954 432 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 SLC5A3P53794 718 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 CLUL1Q15846 466 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 TSR1Q2NL82 804 aaKnown RBP18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 ARHGAP15Q53QZ3 475 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 OTOP3Q7RTS5 596 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 TTC30AQ86WT1 665 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 MSANTD4Q8NCY6 345 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 ZMIZ2Q8NF64 920 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 GIPC2Q8TF65 315 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 KCNK16Q96T55 309 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 APOL5Q9BWW9 433 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 GDE1Q9NZC3 331 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 IL37Q9NZH6 218 aa18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 MRPS23Q9Y3D9 190 aaKnown RBP18.9■□□□□ 0.62
SSSCA1-201ENST00000309328 BRWD1Q9NSI6 2320 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 FAM92AA1XBS5 289 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 LRRC53A6NM62 1247 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 TNFRSF10BO14763 440 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 SART1O43290 800 aaKnown RBP18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 HMGA1P17096 107 aaKnown RBP18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 YWHAQP27348 245 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 PSEN1P49768 467 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 ZNF75DP51815 510 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 CACNA2D1P54289 1103 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 CDR2Q01850 454 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 PDE4CQ08493 712 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 ASIC2Q16515 512 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 PIGZQ86VD9 579 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 TMC8Q8IU68 726 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 CNGA4Q8IV77 575 aa18.89■□□□□ 0.61
SSSCA1-201ENST00000309328 SCML4Q8N228 414 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms