RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZBTB8OSQ8IWT0 167 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM192Q8IY95 271 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 OR5B17Q8NGF7 314 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 C1orf54Q8WWF1 131 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 UTP4Q969X6 686 aaKnown RBP10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 ZNF653Q96CK0 615 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 CCDC97Q96F63 343 aaPredicted RBP10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 CPB2Q96IY4 423 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM134Q9H6X4 195 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 UBN1Q9NPG3 1134 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 ANAPC5Q9UJX4 755 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 RPL26L1Q9UNX3 145 aaKnown RBP10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 C2CD2Q9Y426 696 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
APOBEC3F-201ENST00000308521 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ATF2P15336 505 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 FOXN2P32314 431 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZNF200P98182 395 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 TRIM32Q13049 653 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 PABPC1LQ4VXU2 614 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CYP4X1Q8N118 509 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 SHC3Q92529 594 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 EMID1Q96A84 441 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 KREMEN1Q96MU8 473 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CCDC28BQ9BUN5 200 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MRPL4Q9BYD3 311 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 DCLK3Q9C098 648 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 RNPEPL1Q9HAU8 725 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ETNK1Q9HBU6 452 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 TMEM8AQ9HCN3 771 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 VCX3AQ9NNX9 186 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 RAB20Q9NX57 234 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 NEU2Q9Y3R4 380 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 STYXL1Q9Y6J8 313 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ATMINO43313 823 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ATP6V1C1P21283 382 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CALB2P22676 271 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 YY1P25490 414 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MFAP3P55082 362 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CDR2Q01850 454 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 HIC1Q14526 733 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MYBPC3Q14896 1274 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 KIZQ2M2Z5 673 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZNF484Q5JVG2 852 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 TDRD10Q5VZ19 366 aaKnown RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 ACAD10Q6JQN1 1059 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MAML1Q92585 1016 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 USP6NLQ92738 828 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 BTBD6Q96KE9 485 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 MLXIPLQ9NP71 852 aa10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 CHORDC1Q9UHD1 332 aaPredicted RBP10.83□□□□□ -0.68
APOBEC3F-201ENST00000308521 FAM47DPA6NHR8 397 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 CYP26A1O43174 497 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 TOM1L1O75674 476 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 MYL3P08590 195 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 DESP17661 470 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 RGS2P41220 211 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 EFNA5P52803 228 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 MBTD1Q05BQ5 628 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SREBF2Q12772 1141 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 WASHC2DQ5SRD0 308 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SLFN12LQ6IEE8 588 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 ENDOVQ8N8Q3 282 aaKnown RBP10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 PRDM16Q9HAZ2 1276 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 CHST7Q9NS84 486 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 MYADML2A6NDP7 307 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 PRPF4O43172 522 aaKnown RBP eCLIP10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 DCTN3O75935 186 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 ASMTLO95671 621 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 PIGRP01833 764 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 ACADSP16219 412 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SLC1A1P43005 524 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 HTRA3P83110 453 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 KLC1Q07866 573 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 PTP4A2Q12974 167 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SH2D4BQ5SQS7 431 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 ATF7IP2Q5U623 682 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 TDRPQ86YL5 185 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SRRM1Q8IYB3 904 aaKnown RBP10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 SMC1BQ8NDV3 1235 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 DENND1AQ8TEH3 1009 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 ZSWIM8A7E2V4 1837 aa10.82□□□□□ -0.68
APOBEC3F-201ENST00000308521 A6NJR5 290 aa10.81□□□□□ -0.68
APOBEC3F-201ENST00000308521 TRAFD1O14545 582 aaPredicted RBP10.81□□□□□ -0.68
APOBEC3F-201ENST00000308521 CA12O43570 354 aa10.81□□□□□ -0.68
APOBEC3F-201ENST00000308521 PEX11AO75192 247 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms