RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM183BPQ6ZVS7 135 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 ABI1Q8IZP0 508 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 JOSD2Q8TAC2 188 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 ALG3Q92685 438 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 KRT35Q92764 455 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 C18orf8Q96DM3 657 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MCRS1Q96EZ8 462 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PIWIL1Q96J94 861 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MS4A14Q96JA4 679 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MCEEQ96PE7 176 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 FAM193BQ96PV7 902 aaPredicted RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM209Q96SK2 561 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PKMYT1Q99640 499 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 HNRNPABQ99729 332 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 B3GNT5Q9BYG0 378 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MRPL47Q9HD33 250 aaKnown RBP7.35□□□□□ -1.23
PTCD2-201ENST00000308077 ST7Q9NRC1 585 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MARCH5Q9NX47 278 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 HESX1Q9UBX0 185 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 CDH9Q9ULB4 789 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 STRIP2Q9ULQ0 834 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 PCDHB8Q9UN66 801 aa7.35□□□□□ -1.23
PTCD2-201ENST00000308077 MKI67P46013 3256 aaKnown RBP7.34□□□□□ -1.23
PTCD2-201ENST00000308077 KCNK3O14649 394 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 HOXA2O43364 376 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 BEST1O76090 585 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PROSCO94903 275 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 UPP2O95045 317 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 SETSIPP0DME0 302 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 TYMPP19971 482 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PAX3P23760 479 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PBX3P40426 434 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 SLC11A1P49279 550 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 BCAT1P54687 386 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 BCAR1P56945 870 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 ZNF268Q14587 947 aaPredicted RBP7.34□□□□□ -1.23
PTCD2-201ENST00000308077 RSRC2Q7L4I2 434 aaKnown RBP7.34□□□□□ -1.23
PTCD2-201ENST00000308077 TMCO2Q7Z6W1 182 aaPredicted RBP7.34□□□□□ -1.23
PTCD2-201ENST00000308077 CEP112Q8N8E3 955 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 MNS1Q8NEH6 495 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 OR10T2Q8NGX3 314 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PCED1BQ96HM7 432 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 METTL5Q9NRN9 209 aaKnown RBP7.34□□□□□ -1.23
PTCD2-201ENST00000308077 TMEM30AQ9NV96 361 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 TMLHEQ9NVH6 421 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 DSEQ9UL01 958 aa7.34□□□□□ -1.23
PTCD2-201ENST00000308077 PATJQ8NI35 1801 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 FAM86C2PA6NEL3 165 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 SIGLEC16A6NMB1 481 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MYO1FO00160 1098 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CES2O00748 559 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 SPOPO43791 374 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DGKIO75912 1065 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ACRP10323 421 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RAG1P15918 1043 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTNNA2P26232 953 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PCSK1P29120 753 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTNNA1P35221 906 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PLA2G4AP47712 749 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RPL34P49207 117 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PEX5P50542 639 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RABGGTBP53611 331 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CACNA2D1P54289 1103 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DEFB103AP81534 67 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 INTS6LQ5JSJ4 861 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 OVOS1Q6IE37 1185 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MFSD5Q6N075 450 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TRNP1Q6NT89 227 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 FAM171BQ6P995 826 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CLEC20AQ6ZU45 233 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF572Q7Z3I7 529 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM110Q86TL2 294 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 LRRTM3Q86VH5 581 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM173Q86WV6 379 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 METTL23Q86XA0 190 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 HS6ST3Q8IZP7 471 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 EMC1Q8N766 993 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MSANTD4Q8NCY6 345 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 IPO4Q8TEX9 1081 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CLEC4CQ8WTT0 213 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 PBKQ96KB5 322 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ACBD6Q9BR61 282 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 SELENOOQ9BVL4 669 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 DUSP16Q9BY84 665 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 MRPL9Q9BYD2 267 aaKnown RBP7.33□□□□□ -1.24
PTCD2-201ENST00000308077 RHOBTB2Q9BYZ6 727 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 EPC1Q9H2F5 836 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 SYNCQ9H7C4 482 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 WDR35Q9P2L0 1181 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ADAM28Q9UKQ2 775 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 KIAA1671Q9BY89 1806 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 ABHD14A-ACY1A0A1B0GW23 586 aa7.33□□□□□ -1.24
PTCD2-201ENST00000308077 CTAGE15A4D2H0 777 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms