RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 UBAP2LQ14157 1087 aaKnown RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 KDELC2Q7Z4H8 507 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 TRABD2AQ86V40 505 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 ATG4CQ96DT6 458 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 KIF3CO14782 793 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 MCF2LO15068 1137 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 GZMAP12544 262 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 AQP5P55064 265 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 SLC25A3Q00325 362 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 MAMLD1Q13495 774 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 TRIM50Q86XT4 487 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 CEP120Q8N960 986 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 HEXIM2Q96MH2 286 aaKnown RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 VPS11Q9H270 941 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 LRRC19Q9H756 370 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 GOLGA4Q13439 2230 aaKnown RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 PIK3CDO00329 1044 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 FSCN2O14926 492 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 UGT1A9O60656 530 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 KRT3P12035 628 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 NELFEP18615 380 aaKnown RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
PTPN9-201ENST00000306726 CCNYQ8ND76 341 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 ZNF606Q8WXB4 792 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 UGT1A7Q9HAW7 530 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 UGT1A10Q9HAW8 530 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 UGT1A8Q9HAW9 530 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 GGA2Q9UJY4 613 aa15.24■□□□□ 0.03
PTPN9-201ENST00000306726 GOLGA8QA0A0J9YX86 632 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 GOLGA8OA6NCC3 632 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 GOLGA8NF8WBI6 632 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 FCHO1O14526 889 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 KCNA4P22459 653 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 GLRA2P23416 452 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 RFC1P35251 1148 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 CACNA2D1P54289 1103 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 SATB1Q01826 763 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 PRKCEQ02156 737 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 UNC45BQ8IWX7 931 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 AGGF1Q8N302 714 aaeCLIP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 FBXO27Q8NI29 283 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 NMUR2Q9GZQ4 415 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 MAN1C1Q9NR34 630 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 CYP39A1Q9NYL5 469 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 KBTBD13C9JR72 458 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 PPP1R12AO14974 1030 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 LYPLA1O75608 230 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 GGPS1O95749 300 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 CCNE2O96020 404 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 RASA2Q15283 850 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 ANO5Q75V66 913 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 NDUFAF2Q8N183 169 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 GALNT4Q8N4A0 578 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 SLC7A3Q8WY07 619 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 ZNF408Q9H9D4 720 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 A1CFQ9NQ94 594 aaKnown RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 MYO18AQ92614 2054 aaKnown RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 PEX11AO75192 247 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 FGFR1P11362 822 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 NEK3P51956 506 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 SH3PXD2AQ5TCZ1 1133 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 TDRD10Q5VZ19 366 aaKnown RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 ANO7Q6IWH7 933 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
PTPN9-201ENST00000306726 TRAPPC12Q8WVT3 735 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 IWS1Q96ST2 819 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 TXLNGYQ9BZA5 131 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 ARHGEF3Q9NR81 526 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 POLIQ9UNA4 740 aa15.23■□□□□ 0.03
PTPN9-201ENST00000306726 OAZ1P54368 228 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 RPL10AP62906 217 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 DEUP1Q05D60 604 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 RINLQ6ZS11 566 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 RASSF3Q86WH2 238 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 BBOF1Q8ND07 529 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 DDX27Q96GQ7 796 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 GOLGA8TH3BQL2 631 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 PGM3O95394 542 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 TPBGLP0DKB5 382 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 DRG2P55039 364 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 SLC8A3P57103 927 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 GEMIN4P57678 1058 aaKnown RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 SIX1Q15475 284 aaPredicted RBP15.22■□□□□ 0.03
PTPN9-201ENST00000306726 BMT2Q1RMZ1 405 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 SPOCD1Q6ZMY3 1216 aa15.22■□□□□ 0.03
PTPN9-201ENST00000306726 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms