RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 MPP3Q13368 585 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 MARK2Q7KZI7 788 aaKnown RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 RILPQ96NA2 401 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 GCOM2Q9BZD3 368 aaPredicted RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 TMEM59LQ9UK28 342 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 NR2E1Q9Y466 385 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 KIAA0391O15091 583 aaKnown RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 MMP3P08254 477 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 CTSHP09668 335 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 CASP4P49662 377 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 ARFIP2P53365 341 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 MYL7Q01449 175 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 BTKQ06187 659 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 LAMTOR4Q0VGL1 99 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 MFSD10Q14728 455 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 CCDC110Q8TBZ0 833 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 GLT1D1Q96MS3 346 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 CBWD1Q9BRT8 395 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 CCDC134Q9H6E4 229 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 AGO2Q9UKV8 859 aaKnown RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 ZNF646O15015 1829 aaPredicted RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 PDE5AO76074 875 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 VAV1P15498 845 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 ACOT2P49753 483 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 PSEN2P49810 448 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 MXI1P50539 228 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 OVGP1Q12889 678 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 TAPT1Q6NXT6 567 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
LSM3-201ENST00000306024 UBE4BO95155 1302 aa11.41□□□□□ -0.58
LSM3-201ENST00000306024 GCLMP48507 274 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 ASTE1Q2TB18 679 aaPredicted RBP11.4□□□□□ -0.58
LSM3-201ENST00000306024 MMEL1Q495T6 779 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 C1orf54Q8WWF1 131 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 ALG13Q9NP73 1137 aaKnown RBP11.4□□□□□ -0.58
LSM3-201ENST00000306024 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 SRRDQ9UH36 339 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 LRRN2O75325 713 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 TMEM191BP0C7N4 346 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 CCNB1P14635 433 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 RTP1P59025 263 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 TFAMQ00059 246 aaKnown RBP11.4□□□□□ -0.58
LSM3-201ENST00000306024 HP1BP3Q5SSJ5 553 aaPredicted RBP11.4□□□□□ -0.58
LSM3-201ENST00000306024 B3GNT9Q6UX72 402 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 IKZF4Q9H2S9 585 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 TRABDQ9H4I3 376 aa11.4□□□□□ -0.58
LSM3-201ENST00000306024 A0A087WZ62 844 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 GJB1P08034 283 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 GLRA2P23416 452 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 GSTA3Q16772 222 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 RFWD3Q6PCD5 774 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 FRMD5Q7Z6J6 570 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 MAML1Q92585 1016 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 NSL1Q96IY1 281 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 FDXACB1Q9BRP7 624 aaPredicted RBP11.4□□□□□ -0.59
LSM3-201ENST00000306024 ADAM7Q9H2U9 754 aa11.4□□□□□ -0.59
LSM3-201ENST00000306024 FAM155AB1AL88 458 aaPredicted RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 TISP43B9A030 160 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 LDHAP00338 332 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 HMGCRP04035 888 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 ATP6V1B1P15313 513 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 VAMP7P51809 220 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 KRT17Q04695 432 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MDH1BQ5I0G3 518 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MORN1Q5T089 497 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 OR52E8Q6IFG1 317 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 DSTYKQ6XUX3 929 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 C4orf50Q6ZRC1 276 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 ASRGL1Q7L266 308 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PPM1KQ8N3J5 372 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PCSK9Q8NBP7 692 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 PPP1R14CQ8TAE6 165 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 XPNPEP1Q9NQW7 623 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 HEY2Q9UBP5 337 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 KIAA0100Q14667 2235 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 B2RBV5 119 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 KBTBD13C9JR72 458 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 GALK1P51570 392 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 OCRLQ01968 901 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 ISLR2Q6UXK2 745 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 DAW1Q8N136 415 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 GPD1LQ8N335 351 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 NIFKQ9BYG3 293 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
LSM3-201ENST00000306024 ZNF212Q9UDV6 495 aa11.39□□□□□ -0.59
LSM3-201ENST00000306024 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms