RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 KCTD6Q8NC69 237 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 HSPH1Q92598 858 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 NME7Q9Y5B8 376 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ARVCFO00192 962 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 PRPSAP2O60256 369 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 LRCH4O75427 683 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 PFKMP08237 780 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM153BP0C7A2 387 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 KRT10P13645 584 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 SLC6A3Q01959 620 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 PLCB3Q01970 1234 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM153CQ494X1 144 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 OSTM1Q86WC4 334 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 EIF1ADQ8N9N8 165 aaKnown RBP15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 GSTCDQ8NEC7 633 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 SLC35F5Q8WV83 523 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 LRRC19Q9H756 370 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM153AQ9UHL3 310 aa15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
SHCBP1-201ENST00000303383 THSD7BQ9C0I4 1608 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 GBP1P32455 592 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF143P52747 638 aaPredicted RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 PLTPP55058 493 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 COPS2P61201 443 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 GRIK3Q13003 919 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 CYP1B1Q16678 543 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 TRIM71Q2Q1W2 868 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 TFDP3Q5H9I0 405 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 MDH1BQ5I0G3 518 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 POLNQ7Z5Q5 900 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 STK32AQ8WU08 396 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 LRRC4Q9HBW1 653 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 MTRF1LQ9UGC7 380 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 ODC1P11926 461 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 ZDHHC14Q8IZN3 488 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM149B1Q96BN6 582 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 FMO2Q99518 471 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 TRAIPQ9BWF2 469 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 USP18Q9UMW8 372 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 DNAH12Q6ZR08 3092 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 ATP2C2O75185 946 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 MIPP30301 263 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 DSC3Q14574 896 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 C12orf50Q8NA57 414 aaPredicted RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM118BQ9BPY3 351 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 SYT15Q9BQS2 421 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 CALN1Q9BXU9 219 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 MAK16Q9BXY0 300 aaKnown RBP15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 DCLK3Q9C098 648 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 SAGE1Q9NXZ1 904 aa15.23■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM163BP0C2L3 166 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 PCSK1P29120 753 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 DYNLT1P63172 113 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 KRT17Q04695 432 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 BFSP2Q13515 415 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 TMEM110Q86TL2 294 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 ATL2Q8NHH9 583 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 RAPGEF5Q92565 580 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM193BQ96PV7 902 aaPredicted RBP15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 MED4Q9NPJ6 270 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 TUSC3Q13454 348 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 PKDCCQ504Y2 493 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM53CQ9NYF3 392 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 ZNF148Q9UQR1 794 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 FAM200BP0CF97 657 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 FLT3P36888 993 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 LMNB2Q03252 620 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 SIX1Q15475 284 aaPredicted RBP15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 CCNG2Q16589 344 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 C15orf59Q2T9L4 293 aaPredicted RBP15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 DUPD1Q68J44 220 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 SLC24A5Q71RS6 500 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 UBLCP1Q8WVY7 318 aaPredicted RBP15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 HAUS1Q96CS2 278 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 PIWIL1Q96J94 861 aaKnown RBP15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 HSFY1Q96LI6 401 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 CFAP57Q96MR6 1250 aa15.22■□□□□ 0.03
SHCBP1-201ENST00000303383 C2CD4BA6NLJ0 364 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 I3L4J1 428 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 CLDN5O00501 218 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 PAPSS1O43252 624 aaPredicted RBP15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 PTGIRP43119 386 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 KRT81Q14533 505 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 UPP1Q16831 310 aa15.21■□□□□ 0.03
SHCBP1-201ENST00000303383 LRRC8DQ7L1W4 858 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms