RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
CHAF1A-201ENST00000301280 PGM2Q96G03 612 aa16.34■□□□□ 0.21
CHAF1A-201ENST00000301280 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
CHAF1A-201ENST00000301280 ACSS2Q9NR19 701 aa16.34■□□□□ 0.21
CHAF1A-201ENST00000301280 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.21
CHAF1A-201ENST00000301280 A8MXQ7 604 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 MCF2LO15068 1137 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 OAZ1P54368 228 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 BEX3Q00994 111 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 MXD4Q14582 209 aaPredicted RBP16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 TMEM132DQ14C87 1099 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 CES3Q6UWW8 571 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 FBF1Q8TES7 1133 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 MAIP1Q8WWC4 291 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 ZNF317Q96PQ6 595 aaPredicted RBP16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 EVPLQ92817 2033 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 CCT8L1PA6NM43 557 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 HOXC6P09630 235 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 CCDC130P13994 396 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 CCNG2Q16589 344 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 FNBP1LQ5T0N5 605 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM131BQ86XD5 332 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 AGR3Q8TD06 166 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 P3H4Q92791 437 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 C12orf42Q96LP6 360 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 ECT2Q9H8V3 914 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 CDHR5Q9HBB8 845 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 KLHL14Q9P2G3 628 aa16.33■□□□□ 0.2
CHAF1A-201ENST00000301280 H3BRB1 525 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 MMP13P45452 471 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 CPA2P48052 419 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 CENPUQ71F23 418 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 WDR49Q8IV35 697 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 RCOR2Q8IZ40 523 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 LRRC8CQ8TDW0 803 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 RMDN2Q96LZ7 410 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 IQCGQ9H095 443 aaKnown RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 SMARCAD1Q9H4L7 1026 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 TUT1Q9H6E5 874 aaKnown RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 MYBL1P10243 752 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 GMPRP36959 345 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 RFC5P40937 340 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 PSEN1P49768 467 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 GTF2A2P52657 109 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 PTP4A2Q12974 167 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 PLEKHA7Q6IQ23 1121 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 TRMT10CQ7L0Y3 403 aaKnown RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 EXD1Q8NHP7 514 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 PIN4Q9Y237 131 aaKnown RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 SUN1O94901 812 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 LGALS2P05162 132 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 IVDP26440 423 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ABCD1P33897 745 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 MSH2P43246 934 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ZNF618Q5T7W0 954 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 LVRNQ6Q4G3 990 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 EP400NLQ6ZTU2 488 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 GPC2Q8N158 579 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ACAP3Q96P50 834 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 CCDC134Q9H6E4 229 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ETNK1Q9HBU6 452 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ERAP1Q9NZ08 941 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
CHAF1A-201ENST00000301280 ACKR2O00590 384 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 CDH16O75309 829 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 PIGRP01833 764 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 ADRA1DP25100 572 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 SESN2P58004 480 aaPredicted RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 ATXN2LQ8WWM7 1075 aaKnown RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 ERP27Q96DN0 273 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 SGSM3Q96HU1 749 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 DPEP3Q9H4B8 488 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 DPP3Q9NY33 737 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 WHRNQ9P202 907 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 SLC17A6Q9P2U8 582 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 CYP2B6P20813 491 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 RPL22P35268 128 aaKnown RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 ASPAP45381 313 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 PTK6Q13882 451 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 LACTB2Q53H82 288 aaPredicted RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms