RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 GBP5Q96PP8 586 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 LGALS13Q9UHV8 139 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 MAFBQ9Y5Q3 323 aaPredicted RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 IKBKGQ9Y6K9 419 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 A0A0G2JND7 137 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 SPDYE16A6NNV3 312 aaPredicted RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 PEX11AO75192 247 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 TNNC2P02585 160 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 GNAZP19086 355 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 ADRA1DP25100 572 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 GCAP28676 217 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 CCNFP41002 786 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 CDKN2BP42772 138 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 CLDN10P78369 228 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 PIGHQ14442 188 aaPredicted RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 SGSM1Q2NKQ1 1148 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 BRSK2Q8IWQ3 736 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 ZBTB8OSQ8IWT0 167 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 CTAGE3PQ8IX95 158 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 TMEM192Q8IY95 271 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 REPS2Q8NFH8 660 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 TTC25Q96NG3 672 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 UBN1Q9NPG3 1134 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 GALNT8Q9NY28 637 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 AFG3L2Q9Y4W6 797 aa14.07□□□□□ -0.16
CTDP1-202ENST00000299543 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
CTDP1-202ENST00000299543 LIN7AO14910 233 aaPredicted RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 TOM1L1O75674 476 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 NFASCO94856 1347 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ASMTLO95671 621 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 PGK2P07205 417 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 UBTFL6P0CB48 400 aaPredicted RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ZCCHC18P0CG32 403 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 INHBCP55103 352 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 KLC1Q07866 573 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 HADHQ16836 314 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 TSNAXIP1Q2TAA8 658 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 FAXCQ5TGI0 409 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 NPNTQ6UXI9 565 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 UNC45BQ8IWX7 931 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 VCXQ9H320 206 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 SETSIPP0DME0 302 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 CXCL8P10145 99 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 PTDSS1P48651 473 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 LAMTOR4Q0VGL1 99 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 MKRN3Q13064 507 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 MMRN1Q13201 1228 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 RCN2Q14257 317 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 MORF4L2Q15014 288 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 C1orf228Q6PIY5 440 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 CATSPERGQ6ZRH7 1159 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ZNFX1Q9P2E3 1918 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 CREB3O43889 395 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 POLR2BP30876 1174 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 CLCN3P51790 818 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ARL4CP56559 192 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ZBTB16Q05516 673 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 RNASEH2BQ5TBB1 312 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 OR52E8Q6IFG1 317 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 DTX3LQ8TDB6 740 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 PCYT2Q99447 389 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 NDNQ99608 321 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 ARHGEF3Q9NR81 526 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 PSMC3IPQ9P2W1 217 aaPredicted RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 XPO7Q9UIA9 1087 aaKnown RBP14.06□□□□□ -0.16
CTDP1-202ENST00000299543 STYXL1Q9Y6J8 313 aa14.06□□□□□ -0.16
CTDP1-202ENST00000299543 H7C0C1 242 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 TCEA3O75764 348 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 RBP3P10745 1247 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 RPL22P35268 128 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 ATP5OP48047 213 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 EIF3EP60228 445 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SMAD1Q15797 465 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 GALNTL6Q49A17 601 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 DARS2Q6PI48 645 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CEP128Q6ZU80 1094 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 KIAA0319LQ8IZA0 1049 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SNRNP27Q8WVK2 155 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 TTC17Q96AE7 1141 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 CPXM1Q96SM3 734 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 OGTO15294 1046 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 AVILO75366 819 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 LRCH4O75427 683 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 GPX6P59796 221 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 HSDL1Q3SXM5 330 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SH3PXD2AQ5TCZ1 1133 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 FAM160B1Q5W0V3 765 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 PDIK1LQ8N165 341 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 SPATA18Q8TC71 538 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 TCP10LQ8TDR4 215 aa14.05□□□□□ -0.16
CTDP1-202ENST00000299543 HEXIM2Q96MH2 286 aaKnown RBP14.05□□□□□ -0.16
CTDP1-202ENST00000299543 PAFAH2Q99487 392 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms