RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
SNAPC4-201ENST00000298532 PIK3CDO00329 1044 aa17.08■□□□□ 0.33
SNAPC4-201ENST00000298532 TWF2Q6IBS0 349 aaKnown RBP17.08■□□□□ 0.33
SNAPC4-201ENST00000298532 EXD1Q8NHP7 514 aa17.08■□□□□ 0.33
SNAPC4-201ENST00000298532 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.33
SNAPC4-201ENST00000298532 CYP11B1P15538 503 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 KRR1Q13601 381 aaKnown RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 HORMAD1Q86X24 394 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 CCDC60Q8IWA6 550 aaPredicted RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 GPC2Q8N158 579 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 RIC8BQ9NVN3 520 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 SOX13Q9UN79 622 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 MTSS1O43312 755 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 FDFT1P37268 417 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 RRM2BQ7LG56 351 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 CCDC103Q8IW40 242 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 TNIP2Q8NFZ5 429 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 MPP4Q96JB8 637 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 ZDHHC15Q96MV8 337 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 KLHL25Q9H0H3 589 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 EXOSC4Q9NPD3 245 aaKnown RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 METTL5Q9NRN9 209 aaKnown RBP17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 PTGER2P43116 358 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 CASP4P49662 377 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 STX19Q8N4C7 294 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 TMEM237Q96Q45 408 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 BTBD7Q9P203 1132 aa17.08■□□□□ 0.32
SNAPC4-201ENST00000298532 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 EEF2KO00418 725 aaKnown RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 CNTFP26441 200 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 CASP10Q92851 521 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 TMEM143Q96AN5 459 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 RBBP8Q99708 897 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ZNF556Q9HAH1 456 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 FAM32AQ9Y421 112 aaKnown RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 FCHO1O14526 889 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 DLGAP3O95886 979 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 SOX11P35716 441 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 KDELC2Q7Z4H8 507 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 SHCBP1Q8NEM2 672 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 MYLK2Q9H1R3 596 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 SYBUQ9NX95 663 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ZNF197O14709 1029 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 GRAP2O75791 330 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 PROSCO94903 275 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 STAT5BP51692 787 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 BTBD8Q5XKL5 378 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 LPCAT2Q7L5N7 544 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ILDR1Q86SU0 546 aaPredicted RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 MREGQ8N565 214 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 RUSC1Q9BVN2 902 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 RFC5P40937 340 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 AGAP11Q8TF27 550 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 ZNF184Q99676 751 aaPredicted RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 NAT9Q9BTE0 207 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
SNAPC4-201ENST00000298532 FKBP9O95302 570 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 CUL2Q13617 745 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 FAM83EQ2M2I3 478 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 ANO4Q32M45 955 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 NAPEPLDQ6IQ20 393 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 FKBP9P1Q75LS8 142 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 ATPAF2Q8N5M1 289 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 SHOC2Q9UQ13 582 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 SNX9Q9Y5X1 595 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 TFE3P19532 575 aaPredicted RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 SPON2Q9BUD6 331 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 SLCO1B7G3V0H7 640 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 TNFAIP8O95379 198 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 RALBP11234 206 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 OTUD4Q01804 1114 aaKnown RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 TBL3Q12788 808 aaKnown RBP17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 SEL1L3Q68CR1 1132 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 ZBTB49Q6ZSB9 765 aa17.06■□□□□ 0.32
SNAPC4-201ENST00000298532 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms