RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 SLITRK1Q96PX8 696 aa14.99□□□□□ -0.01
C9orf3-202ENST00000297979 DAPK3O43293 454 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 GPD1P21695 349 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 IGFBP6P24592 240 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ECHS1P30084 290 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 GRIK3Q13003 919 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 GPS2Q13227 327 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 HADHQ16836 314 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ODF2Q5BJF6 829 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 TXNRD3NBQ6F5E7 133 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 OLFML1Q6UWY5 402 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 TMEM86AQ8N2M4 240 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 C3orf58Q8NDZ4 430 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ERP44Q9BS26 406 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 HEMGNQ9BXL5 484 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 TDRD15B5MCY1 1934 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 POMCP01189 267 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 KRT7P08729 469 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ZNF143P52747 638 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 COPS2P61201 443 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 UPP1Q16831 310 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ZNF598Q86UK7 904 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ZDHHC17Q8IUH5 632 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ARFGAP1Q8N6T3 406 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 PIWIL1Q96J94 861 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 UBXN6Q9BZV1 441 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 DPH5Q9H2P9 285 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 C2CD4BA6NLJ0 364 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 CAPN15O75808 1086 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 RNF8O76064 485 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 FAM153BP0C7A2 387 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 SLC6A3Q01959 620 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 MBTPS1Q14703 1052 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 FAM153CQ494X1 144 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 DUPD1Q68J44 220 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 ANKS1BQ7Z6G8 1248 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 HNRNPABQ99729 332 aaKnown RBP14.98□□□□□ -0.01
C9orf3-202ENST00000297979 CYLDQ9NQC7 956 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 RGS18Q9NS28 235 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 HOMER3Q9NSC5 361 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 FAM153AQ9UHL3 310 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 INPP5FQ9Y2H2 1132 aa14.98□□□□□ -0.01
C9orf3-202ENST00000297979 PTPN1P18031 435 aaKnown RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ACAT1P24752 427 aaKnown RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 TKTP29401 623 aaKnown RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 LHX1P48742 406 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 KCTD19Q17RG1 926 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ZNF280DQ6N043 979 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 MFSD7Q6UXD7 560 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 SPOCD1Q6ZMY3 1216 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 RXFP2Q8WXD0 754 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 CNPY3Q9BT09 278 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 SEZ6LQ9BYH1 1024 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 TRIM31Q9BZY9 425 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 DCLK3Q9C098 648 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ZWILCHQ9H900 591 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 PAPSS1O43252 624 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ATP2C2O75185 946 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ECEL1O95672 775 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 PDGFRAP16234 1089 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 PTPN7P35236 360 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 AARSP49588 968 aaKnown RBP eCLIP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 TUSC3Q13454 348 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 TRNP1Q6NT89 227 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 RAPGEF5Q92565 580 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 ACSF2Q96CM8 615 aaPredicted RBP14.97□□□□□ -0.01
C9orf3-202ENST00000297979 PAAF1Q9BRP4 392 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 UNC93B1Q9H1C4 597 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 CHST7Q9NS84 486 aa14.97□□□□□ -0.01
C9orf3-202ENST00000297979 DNM1LO00429 736 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 GRAP2O75791 330 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 GABBR2O75899 941 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 PCK1P35558 622 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 FLT3P36888 993 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 ACADSBP45954 432 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 KCNJ1P48048 391 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 RPL34P49207 117 aaKnown RBP14.96□□□□□ -0.01
C9orf3-202ENST00000297979 SCUBE3Q8IX30 993 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 FUKQ8N0W3 1084 aa14.96□□□□□ -0.01
C9orf3-202ENST00000297979 R3HDM2Q9Y2K5 976 aaKnown RBP14.96□□□□□ -0.01
C9orf3-202ENST00000297979 C9IYK1 514 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 DPYSL4O14531 572 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 INPPL1O15357 1258 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 TPD52L2O43399 206 aaKnown RBP14.96□□□□□ -0.02
C9orf3-202ENST00000297979 TJP3O95049 919 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 IL1R2P27930 398 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 MIPP30301 263 aa14.96□□□□□ -0.02
C9orf3-202ENST00000297979 DRG2P55039 364 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms