RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TSHZ1Q6ZSZ6 1077 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 C3orf62Q6ZUJ4 267 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ILDR2Q71H61 639 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 FAM131BQ86XD5 332 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 PHF13Q86YI8 300 aaPredicted RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC63Q8NA47 563 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CHMP6Q96FZ7 201 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 FAM129AQ9BZQ8 928 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 FZD8Q9H461 694 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 DPEP3Q9H4B8 488 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 LRRC19Q9H756 370 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 NINJ2Q9NZG7 142 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ABT1Q9ULW3 272 aaKnown RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 NAALADL1Q9UQQ1 740 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 TNFSF13BQ9Y275 285 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 GRIN2DO15399 1336 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 GLTPD2A6NH11 291 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 A6NJR5 290 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CLDN5O00501 218 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 TTC4O95801 387 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 EDNRBP24530 442 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 GTF2A2P52657 109 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 GDF10P55107 478 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 AUHQ13825 339 aaKnown RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CCNG2Q16589 344 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ZNF618Q5T7W0 954 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CYP4X1Q8N118 509 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 NPLOC4Q8TAT6 608 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CLEC4CQ8WTT0 213 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 FGD4Q96M96 766 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 PSTPIP1O43586 416 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 LRCH4O75427 683 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 SNAI1O95863 264 aaPredicted RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ZBED1O96006 694 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 KRT7P08729 469 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 CXCL17Q6UXB2 119 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 UNC45BQ8IWX7 931 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 C12orf50Q8NA57 414 aaPredicted RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 FAM172AQ8WUF8 416 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 LPPQ93052 612 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ART4Q93070 314 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 AGAP3Q96P47 875 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 XYLT2Q9H1B5 865 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 ASNSD1Q9NWL6 643 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 GGA2Q9UJY4 613 aa9.75□□□□□ -0.85
PRDM9-201ENST00000296682 TPX2Q9ULW0 747 aaKnown RBP9.75□□□□□ -0.85
PRDM9-201ENST00000296682 IL18RAPO95256 599 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 FAM107AO95990 144 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 YY1P25490 414 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 LMO2P25791 158 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 MAN1A1P33908 653 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 GNL1P36915 607 aaPredicted RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 HIF1AQ16665 826 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 DCAF6Q58WW2 860 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 CENPUQ71F23 418 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 CTU1Q7Z7A3 348 aaKnown RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 BEST2Q8NFU1 509 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 XPO7Q9UIA9 1087 aaKnown RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 ADGRA2Q96PE1 1338 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 HUS1O60921 280 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 SAT1P21673 171 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 LMNB2Q03252 620 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 SIX1Q15475 284 aaPredicted RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 PMF1Q6P1K2 205 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 FAM183BPQ6ZVS7 135 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 TLK2Q86UE8 772 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 PDIK1LQ8N165 341 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 PPM1NQ8N819 430 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC197Q8NCU1 140 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 C3orf20Q8ND61 904 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 IQCGQ9H095 443 aaKnown RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 LRRC4Q9HBW1 653 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 SLC5A4Q9NY91 659 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 TSPAN1O60635 241 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 GPD1P21695 349 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 SLC26A2P50443 739 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 ERFP50548 548 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 DNAJC3Q13217 504 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 TAPT1Q6NXT6 567 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 TBC1D1Q86TI0 1168 aaPredicted RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 MAML3Q96JK9 1138 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 ZMAT2Q96NC0 199 aaKnown RBP9.74□□□□□ -0.85
PRDM9-201ENST00000296682 ABHD16BQ9H3Z7 469 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 DCTN4Q9UJW0 460 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
PRDM9-201ENST00000296682 M0QZ92 97 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 LIASO43766 372 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 GAS2O43903 313 aaKnown RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 MCM3APO60318 1980 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 EIF4BP23588 611 aaKnown RBP9.73□□□□□ -0.85
PRDM9-201ENST00000296682 GBP1P32455 592 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 SLC8A3P57103 927 aa9.73□□□□□ -0.85
PRDM9-201ENST00000296682 CACNB2Q08289 660 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms