RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PCMTD2Q9NV79 361 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 TJP2Q9UDY2 1190 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 PSAPP07602 524 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 HIRAP54198 1017 aaPredicted RBP15.37■□□□□ 0.05
CCNF-201ENST00000293968 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 APOPT1Q96IL0 206 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 PPCSQ9HAB8 311 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 CYP4F11Q9HBI6 524 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 RAB6BQ9NRW1 208 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 TCRBV9S1A1TA0A576 114 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 MAGEA13PA6NCF6 341 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 NPTXRO95502 500 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 TAF5Q15542 800 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 CCDC33Q8N5R6 958 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 DCAKDQ8WVC6 231 aa15.37■□□□□ 0.05
CCNF-201ENST00000293968 TRAFD1O14545 582 aaPredicted RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 CYB561D2O14569 222 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 NDC80O14777 642 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 EMC2Q15006 297 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 ISLR2Q6UXK2 745 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 SCUBE1Q8IWY4 988 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 MTBPQ96DY7 904 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 PTCD3Q96EY7 689 aaKnown RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 LBRQ14739 615 aaKnown RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 CWF19L1Q69YN2 538 aaKnown RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 TAS1R3Q7RTX0 852 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CCDC60Q8IWA6 550 aaPredicted RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 SAMD3Q8N6K7 520 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 PHC3Q8NDX5 983 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 ZNF398Q8TD17 642 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CYLDQ9NQC7 956 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 ZNRF3Q9ULT6 936 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 E5RJQ4 531 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 NR3C2P08235 984 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 SLC18A1P54219 525 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 RIPOR1Q6ZS17 1223 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 RBM15BQ8NDT2 890 aaKnown RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 NKD2Q969F2 451 aaPredicted RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 PXMP2Q9NR77 195 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CISHQ9NSE2 258 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 ZNF536O15090 1300 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 KRT37O76014 449 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 RNF8O76064 485 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 ASNSP08243 561 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 MMRN1Q13201 1228 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 MROH9Q5TGP6 573 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 CDR2LQ86X02 465 aaPredicted RBP15.36■□□□□ 0.05
CCNF-201ENST00000293968 CRLF3Q8IUI8 442 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 E2F7Q96AV8 911 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 SNCAIPQ9Y6H5 919 aa15.36■□□□□ 0.05
CCNF-201ENST00000293968 RAP1GAPP47736 663 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 ROR1Q01973 937 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 AP1B1Q10567 949 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 BST1Q10588 318 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 BSPRYQ5W0U4 402 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 POU5F2Q8N7G0 328 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 TTC13Q8NBP0 860 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 JPH1Q9HDC5 661 aaPredicted RBP15.35■□□□□ 0.05
CCNF-201ENST00000293968 RNF146Q9NTX7 359 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 GRAP2O75791 330 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 APRTP07741 180 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 KRT7P08729 469 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 CCND2P30279 289 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 TNFSF9P41273 254 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 AP2B1P63010 937 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 ROR2Q01974 943 aaKnown RBP15.35■□□□□ 0.05
CCNF-201ENST00000293968 UBAP2LQ14157 1087 aaKnown RBP15.35■□□□□ 0.05
CCNF-201ENST00000293968 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 THNSL1Q8IYQ7 743 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 SLC26A7Q8TE54 656 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 STX18Q9P2W9 335 aaKnown RBP15.35■□□□□ 0.05
CCNF-201ENST00000293968 KAT6AQ92794 2004 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 IL1R2P27930 398 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 SERPINB6P35237 376 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 CDH6P55285 790 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 MRIQ9BWK5 157 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 ETAA1Q9NY74 926 aa15.35■□□□□ 0.05
CCNF-201ENST00000293968 ZC3H7BQ9UGR2 993 aaKnown RBP15.35■□□□□ 0.05
CCNF-201ENST00000293968 E2F8A0AVK6 867 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 KLRG2A4D1S0 409 aaPredicted RBP15.34■□□□□ 0.05
CCNF-201ENST00000293968 CCDC160A6NGH7 325 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 ETS2P15036 469 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 POLR2BP30876 1174 aaKnown RBP15.34■□□□□ 0.05
CCNF-201ENST00000293968 LGSNQ5TDP6 509 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 NIPA1Q7RTP0 329 aa15.34■□□□□ 0.05
CCNF-201ENST00000293968 H0YCG3 227 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms