RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SLC1A5Q15758 541 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 HIF1AQ16665 826 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 TRMT1LQ7Z2T5 733 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 NAT8LQ8N9F0 302 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 GLIS1Q8NBF1 620 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 MCUR1Q96AQ8 359 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 PTCD3Q96EY7 689 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 SH2D3AQ9BRG2 576 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 PORCNQ9H237 461 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 DHX33Q9H6R0 707 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 ZWILCHQ9H900 591 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 NPHS2Q9NP85 383 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ANKFY1Q9P2R3 1169 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 SH3BP1Q9Y3L3 701 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 PPME1Q9Y570 386 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 TNS1Q9HBL0 1735 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 ANK1P16157 1881 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ZNF541Q9H0D2 1346 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ATG7O95352 703 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ASS1P00966 412 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 PRKCEQ02156 737 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 CDK18Q07002 472 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 BBS12Q6ZW61 710 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 PRUNE1Q86TP1 453 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 VPS52Q8N1B4 723 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 BANPQ8N9N5 519 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 NSL1Q96IY1 281 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 NDNQ99608 321 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 HAPLN2Q9GZV7 340 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 METTL5Q9NRN9 209 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 RBAKQ9NYW8 714 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 STRIP2Q9ULQ0 834 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ZNRF3Q9ULT6 936 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 NUB1Q9Y5A7 615 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 KLF11O14901 512 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 LYNP07948 512 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 NR3C2P08235 984 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 MYCLP12524 364 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 ARL4CP56559 192 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 KRT72Q14CN4 511 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 FASTKD3Q14CZ7 662 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 EMC2Q15006 297 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 LLGL1Q15334 1064 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 CNPY1Q3B7I2 92 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 CIAPIN1Q6FI81 312 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 WDR49Q8IV35 697 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 NIM1KQ8IY84 436 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 THNSL1Q8IYQ7 743 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 TMEM35BQ8NCS4 154 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 SMC1BQ8NDV3 1235 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 APBB2Q92870 758 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 MAK16Q9BXY0 300 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 UBE2OQ9C0C9 1292 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 JPH1Q9HDC5 661 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 LMCD1Q9NZU5 365 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ATXN10Q9UBB4 475 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 SLC9A2Q9UBY0 812 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ANGPTL2Q9UKU9 493 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 IVNS1ABPQ9Y6Y0 642 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 SPATA31C2B4DYI2 1134 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 SPAG6O75602 509 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 PENKP01210 267 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 SUPT20HL2P0C7V6 817 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 GLRA2P23416 452 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 DNAJC24Q6P3W2 148 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ZPBP2Q6X784 338 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 BRSK2Q8IWQ3 736 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ZBED8Q8IZ13 594 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 RTKN2Q8IZC4 609 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 DCAKDQ8WVC6 231 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 SPATA16Q9BXB7 569 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 ASCC2Q9H1I8 757 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
SKA1-201ENST00000285116 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
SKA1-201ENST00000285116 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 VWA5AO00534 786 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 RGS20O76081 388 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 KRT10P13645 584 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 ICAM3P32942 547 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 GMPSP49915 693 aaPredicted RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 PDIA2Q13087 525 aaKnown RBP10.84□□□□□ -0.67
SKA1-201ENST00000285116 NCOA4Q13772 614 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 ACAP1Q15027 740 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 SPOPLQ6IQ16 392 aa10.84□□□□□ -0.67
SKA1-201ENST00000285116 LVRNQ6Q4G3 990 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms