RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 TTC39CQ8N584 583 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 ARFGAP1Q8N6T3 406 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 ACSF2Q96CM8 615 aaPredicted RBP22.07■■□□□ 1.12
YBX3-202ENST00000279550 DCLK3Q9C098 648 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 TSPAN16Q9UKR8 245 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 ENPP3O14638 875 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 KRT1P04264 644 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 KRT3P12035 628 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 PIGHQ14442 188 aaPredicted RBP22.06■■□□□ 1.12
YBX3-202ENST00000279550 ZNF268Q14587 947 aaPredicted RBP22.06■■□□□ 1.12
YBX3-202ENST00000279550 SOWAHAQ2M3V2 549 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 TCTN1Q2MV58 587 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 DEFB128Q7Z7B8 93 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 EMC1Q8N766 993 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 MCRS1Q96EZ8 462 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 OSBPL8Q9BZF1 889 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 KIAA1257Q9ULG3 409 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 SCN5AQ14524 2016 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 FGFR1P11362 822 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 LRPAP1P30533 357 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 LRRC38Q5VT99 294 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 MAIP1Q8WWC4 291 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 SLITRK1Q96PX8 696 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 SYNCQ9H7C4 482 aa22.06■■□□□ 1.12
YBX3-202ENST00000279550 TRIM43BA6NCK2 446 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 PIK3R2O00459 728 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 PSMA2P25787 234 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 HSD17B3P37058 310 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 DRG2P55039 364 aaKnown RBP22.05■■□□□ 1.12
YBX3-202ENST00000279550 PPP1R26Q5T8A7 1209 aaPredicted RBP22.05■■□□□ 1.12
YBX3-202ENST00000279550 MFSD7Q6UXD7 560 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 TRIM43Q96BQ3 446 aaPredicted RBP22.05■■□□□ 1.12
YBX3-202ENST00000279550 RUNDC3BQ96NL0 473 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 FAM118BQ9BPY3 351 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 DPEP3Q9H4B8 488 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 PRDM5Q9NQX1 630 aaPredicted RBP22.05■■□□□ 1.12
YBX3-202ENST00000279550 FAM49BQ9NUQ9 324 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 TMEM161AQ9NX61 479 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 WDR35Q9P2L0 1181 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 LCMT1Q9UIC8 334 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.05■■□□□ 1.12
YBX3-202ENST00000279550 TET1Q8NFU7 2136 aa22.05■■□□□ 1.12
YBX3-202ENST00000279550 TULP2O00295 520 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 KIAA0355O15063 1070 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 INPPL1O15357 1258 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 TIMP1P01033 207 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 ADCY2Q08462 1091 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 TMC3Q7Z5M5 1100 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 TTC30AQ86WT1 665 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 RCOR2Q8IZ40 523 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 KBTBD7Q8WVZ9 684 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 RAPGEF5Q92565 580 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 ARL8AQ96BM9 186 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 ZNF560Q96MR9 790 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 ELAC1Q9H777 363 aaKnown RBP22.04■■□□□ 1.12
YBX3-202ENST00000279550 ADAM21Q9UKJ8 722 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 INPP5FQ9Y2H2 1132 aa22.04■■□□□ 1.12
YBX3-202ENST00000279550 PODXLO00592 558 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 ECEL1O95672 775 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 POMCP01189 267 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 KRT10P13645 584 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 ITGB8P26012 769 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 RFC2P35250 354 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 PNPLA4P41247 253 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 GRIK3Q13003 919 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 PKDCCQ504Y2 493 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 GLB1LQ6UWU2 654 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 SLCO2A1Q92959 643 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 PIWIL1Q96J94 861 aaKnown RBP22.03■■□□□ 1.12
YBX3-202ENST00000279550 TXLNGYQ9BZA5 131 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 PLAAQ9Y263 795 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 E5RJQ4 531 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 LRCH4O75427 683 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 RGS7P49802 495 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 PLTPP55058 493 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 SLC25A11Q02978 314 aaKnown RBP22.03■■□□□ 1.12
YBX3-202ENST00000279550 TTMPQ5BVD1 217 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 CLLU1OSQ5K130 101 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 TRNP1Q6NT89 227 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 SPOCD1Q6ZMY3 1216 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 FAM183BPQ6ZVS7 135 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 OR6B3Q8NGW1 331 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 FBXO25Q8TCJ0 367 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 LRRC45Q96CN5 670 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 VWCEQ96DN2 955 aa22.03■■□□□ 1.12
YBX3-202ENST00000279550 RBM41Q96IZ5 413 aaKnown RBP22.03■■□□□ 1.12
YBX3-202ENST00000279550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.02■■□□□ 1.12
YBX3-202ENST00000279550 RAG1P15918 1043 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 IL1R2P27930 398 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 KRT17Q04695 432 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 DHX9Q08211 1270 aaKnown RBP22.02■■□□□ 1.12
YBX3-202ENST00000279550 FAM102AQ5T9C2 384 aaPredicted RBP22.02■■□□□ 1.12
YBX3-202ENST00000279550 FNIP1Q8TF40 1166 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 FMO2Q99518 471 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 FAM204AQ9H8W3 233 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 CACNG4Q9UBN1 327 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 PCDHB7Q9Y5E2 793 aa22.02■■□□□ 1.12
YBX3-202ENST00000279550 KPNA7A9QM74 516 aa22.01■■□□□ 1.11
YBX3-202ENST00000279550 H0YGN5 161 aa22.01■■□□□ 1.11
YBX3-202ENST00000279550 OPA1O60313 960 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms