RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ANXA13P27216 316 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 GGCXP38435 758 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 DYNLT1P63172 113 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 ZNF252P-AS1Q0IIN9 211 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 SMC1AQ14683 1233 aaKnown RBP14.02□□□□□ -0.17
ACER3-201ENST00000278544 PAPD7Q5XG87 772 aaKnown RBP14.02□□□□□ -0.17
ACER3-201ENST00000278544 RSPO2Q6UXX9 243 aaPredicted RBP14.02□□□□□ -0.17
ACER3-201ENST00000278544 HSPH1Q92598 858 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 L2HGDHQ9H9P8 463 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 CERS4Q9HA82 394 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 INTUQ9ULD6 942 aa14.02□□□□□ -0.17
ACER3-201ENST00000278544 CALB1P05937 261 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 FAM200BP0CF97 657 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 KRT10P13645 584 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 WDR5P61964 334 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 DSC1Q08554 894 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 ODF2Q5BJF6 829 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 CLEC20AQ6ZU45 233 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 FAM35AQ86V20 835 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 TMPRSS4Q9NRS4 437 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 RBM12Q9NTZ6 932 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 REV3LO60673 3130 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 STAU1O95793 577 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 MYOGP15173 224 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 SNX1Q13596 522 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 TRNP1Q6NT89 227 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 FUT10Q6P4F1 479 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 CNKSR3Q6P9H4 555 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 TMEM199Q8N511 208 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 RXFP2Q8WXD0 754 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 RIN2Q8WYP3 895 aaPredicted RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 SEPT5Q99719 369 aaPredicted RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 WARSP23381 471 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 PAFAH1B1P43034 410 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 TKTL1P51854 596 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 MFSD5Q6N075 450 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 ZNF662Q6ZS27 426 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 UNC93AQ86WB7 457 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 ANKRD52Q8NB46 1076 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 SLC35F5Q8WV83 523 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 SMOQ99835 787 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.01□□□□□ -0.17
ACER3-201ENST00000278544 TRIM31Q9BZY9 425 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 DDX47Q9H0S4 455 aaKnown RBP14.01□□□□□ -0.17
ACER3-201ENST00000278544 MARCH5Q9NX47 278 aa14.01□□□□□ -0.17
ACER3-201ENST00000278544 GABRDO14764 452 aa14□□□□□ -0.17
ACER3-201ENST00000278544 LHX1P48742 406 aa14□□□□□ -0.17
ACER3-201ENST00000278544 BST2Q10589 180 aaKnown RBP14□□□□□ -0.17
ACER3-201ENST00000278544 NME3Q13232 169 aa14□□□□□ -0.17
ACER3-201ENST00000278544 DCAF6Q58WW2 860 aa14□□□□□ -0.17
ACER3-201ENST00000278544 GSPT2Q8IYD1 628 aaKnown RBP14□□□□□ -0.17
ACER3-201ENST00000278544 SYCE1Q8N0S2 351 aa14□□□□□ -0.17
ACER3-201ENST00000278544 SIX6OS1Q8N1H7 587 aa14□□□□□ -0.17
ACER3-201ENST00000278544 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
ACER3-201ENST00000278544 HDAC7Q8WUI4 952 aa14□□□□□ -0.17
ACER3-201ENST00000278544 ULBP1Q9BZM6 244 aa14□□□□□ -0.17
ACER3-201ENST00000278544 MRPL47Q9HD33 250 aaKnown RBP14□□□□□ -0.17
ACER3-201ENST00000278544 KANSL3Q9P2N6 904 aa14□□□□□ -0.17
ACER3-201ENST00000278544 UVRAGQ9P2Y5 699 aa14□□□□□ -0.17
ACER3-201ENST00000278544 CDY1Q9Y6F8 540 aa14□□□□□ -0.17
ACER3-201ENST00000278544 ESYT3A0FGR9 886 aa14□□□□□ -0.17
ACER3-201ENST00000278544 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
ACER3-201ENST00000278544 LSM8O95777 96 aaKnown RBP14□□□□□ -0.17
ACER3-201ENST00000278544 CXCL10P02778 98 aa14□□□□□ -0.17
ACER3-201ENST00000278544 BCAT1P54687 386 aa14□□□□□ -0.17
ACER3-201ENST00000278544 TSPY1Q01534 308 aa14□□□□□ -0.17
ACER3-201ENST00000278544 LONRF2Q1L5Z9 754 aa14□□□□□ -0.17
ACER3-201ENST00000278544 PLEKHA7Q6IQ23 1121 aa14□□□□□ -0.17
ACER3-201ENST00000278544 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
ACER3-201ENST00000278544 THEM5Q8N1Q8 247 aa14□□□□□ -0.17
ACER3-201ENST00000278544 TAB3Q8N5C8 712 aaPredicted RBP14□□□□□ -0.17
ACER3-201ENST00000278544 SUSD3Q96L08 255 aa14□□□□□ -0.17
ACER3-201ENST00000278544 KRT12Q99456 494 aa14□□□□□ -0.17
ACER3-201ENST00000278544 A0A0A6YYK5 440 aaPredicted RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 NPR3P17342 541 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 PCSK1P29120 753 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 SLC8A3P57103 927 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 COL13A1Q5TAT6 717 aaPredicted RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 APBB2Q92870 758 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 SAE1Q9UBE0 346 aaPredicted RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 LCHNA4D1U4 455 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 PGFP49763 221 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 MGAT5BQ3V5L5 792 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 ZMIZ2Q8NF64 920 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 GIPC2Q8TF65 315 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 HERPUD2Q9BSE4 406 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 LHX5Q9H2C1 402 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 TMEM191CA6NGB0 347 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 DDX3YO15523 660 aaKnown RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 MTMR3Q13615 1198 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 FAM109BQ6ICB4 259 aaPredicted RBP13.99□□□□□ -0.17
ACER3-201ENST00000278544 ANKS1BQ7Z6G8 1248 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 C3orf20Q8ND61 904 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
ACER3-201ENST00000278544 ATG4AQ8WYN0 398 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms