RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PRAMEF25A6NGN4 478 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 LGALS16A8MUM7 142 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 H0Y626 953 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SYT5O00445 386 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 NPC1O15118 1278 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 DTNBO60941 627 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 TBCAO75347 108 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 RTN3O95197 1032 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 PLATP00750 562 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 CYP17A1P05093 508 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 CLTBP09497 229 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 HARSP12081 509 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 SCG2P13521 617 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 RPS2P15880 293 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 PORP16435 677 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 FAHP16930 419 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 ATP5F1P24539 256 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 LSP1P33241 339 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 TRPC1P48995 793 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 POLD2P49005 469 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 MTNR1BP49286 362 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 VAMP2P63027 116 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 IFI35P80217 286 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 LRRC74AQ0VAA2 488 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 AP1B1Q10567 949 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 ADAM15Q13444 863 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 EFR3AQ14156 821 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 VMACQ2NL98 169 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 UAP1L1Q3KQV9 507 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 MMEL1Q495T6 779 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 HSP90B2PQ58FF3 399 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 C16orf87Q6PH81 154 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 DPP8Q6V1X1 898 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 CCDC91Q7Z6B0 441 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SLC9B2Q86UD5 537 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 LIX1LQ8IVB5 337 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 ZNF619Q8N2I2 560 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 CISD2Q8N5K1 135 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 GSDMBQ8TAX9 411 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SPPL3Q8TCT6 385 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 GIMAP1Q8WWP7 306 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 COA7Q96BR5 231 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 ZNF845Q96IR2 970 aaPredicted RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 CNDP2Q96KP4 475 aaKnown RBP5.01□□□□□ -1.61
CD44-202ENST00000278385 YME1L1Q96TA2 773 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 CGRRF1Q99675 332 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 GORASP1Q9BQQ3 440 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SYT17Q9BSW7 474 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 STK33Q9BYT3 514 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 EDEM3Q9BZQ6 932 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 ZDHHC5Q9C0B5 715 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SIL1Q9H173 461 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 HPF1Q9NWY4 346 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 DNAJC28Q9NX36 388 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 SRPK3Q9UPE1 567 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 CEP83Q9Y592 693 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 PCDHGB5Q9Y5G0 923 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 PALLDQ8WX93 1383 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 LRP5O75197 1615 aa5.01□□□□□ -1.61
CD44-202ENST00000278385 FLT1P17948 1338 aa5□□□□□ -1.61
CD44-202ENST00000278385 PNPLA7Q6ZV29 1317 aa5□□□□□ -1.61
CD44-202ENST00000278385 FAM208AQ9UK61 1670 aaKnown RBP5□□□□□ -1.61
CD44-202ENST00000278385 ERICH4A6NGS2 130 aa5□□□□□ -1.61
CD44-202ENST00000278385 BTBD11A6QL63 1104 aa5□□□□□ -1.61
CD44-202ENST00000278385 APOL1O14791 398 aa5□□□□□ -1.61
CD44-202ENST00000278385 TSPAN3O60637 253 aa5□□□□□ -1.61
CD44-202ENST00000278385 PTP4A3O75365 173 aa5□□□□□ -1.61
CD44-202ENST00000278385 TPPPO94811 219 aa5□□□□□ -1.61
CD44-202ENST00000278385 TMEM63AO94886 807 aa5□□□□□ -1.61
CD44-202ENST00000278385 IL18RAPO95256 599 aa5□□□□□ -1.61
CD44-202ENST00000278385 GUCA1CO95843 209 aa5□□□□□ -1.61
CD44-202ENST00000278385 HDCP19113 662 aa5□□□□□ -1.61
CD44-202ENST00000278385 CTSSP25774 331 aa5□□□□□ -1.61
CD44-202ENST00000278385 SLC12A2P55011 1212 aa5□□□□□ -1.61
CD44-202ENST00000278385 ARF3P61204 181 aaPredicted RBP5□□□□□ -1.61
CD44-202ENST00000278385 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
CD44-202ENST00000278385 PTK2BQ14289 1009 aa5□□□□□ -1.61
CD44-202ENST00000278385 SF3B3Q15393 1217 aaKnown RBP5□□□□□ -1.61
CD44-202ENST00000278385 ZNF174Q15697 407 aa5□□□□□ -1.61
CD44-202ENST00000278385 SMAD1Q15797 465 aaKnown RBP5□□□□□ -1.61
CD44-202ENST00000278385 SLC35G1Q2M3R5 365 aa5□□□□□ -1.61
CD44-202ENST00000278385 CR1LQ2VPA4 569 aa5□□□□□ -1.61
CD44-202ENST00000278385 ODF2Q5BJF6 829 aa5□□□□□ -1.61
CD44-202ENST00000278385 LRCH2Q5VUJ6 765 aa5□□□□□ -1.61
CD44-202ENST00000278385 GPR139Q6DWJ6 353 aa5□□□□□ -1.61
CD44-202ENST00000278385 IRGCQ6NXR0 463 aa5□□□□□ -1.61
CD44-202ENST00000278385 ALKBH5Q6P6C2 394 aaKnown RBP5□□□□□ -1.61
CD44-202ENST00000278385 ZNF530Q6P9A1 599 aaPredicted RBP5□□□□□ -1.61
CD44-202ENST00000278385 BORAQ6PGQ7 559 aa5□□□□□ -1.61
CD44-202ENST00000278385 CCBE1Q6UXH8 406 aaPredicted RBP5□□□□□ -1.61
CD44-202ENST00000278385 TMC5Q6UXY8 1006 aa5□□□□□ -1.61
CD44-202ENST00000278385 B4GALNT4Q76KP1 1039 aa5□□□□□ -1.61
CD44-202ENST00000278385 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
CD44-202ENST00000278385 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
CD44-202ENST00000278385 OR8H3Q8N146 312 aa5□□□□□ -1.61
CD44-202ENST00000278385 ZNF610Q8N9Z0 462 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms