RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
MRPS28-201ENST00000276585 CEP72Q9P209 647 aa13.22□□□□□ -0.29
MRPS28-201ENST00000276585 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
MRPS28-201ENST00000276585 SIX4Q9UIU6 781 aa13.22□□□□□ -0.29
MRPS28-201ENST00000276585 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
MRPS28-201ENST00000276585 UBE4BO95155 1302 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 OR6C75A6NL08 312 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 OPHN1O60890 802 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 EGFP01133 1207 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 SLFN14P0C7P3 912 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ODC1P11926 461 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 CPB1P15086 417 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 BCKDHBP21953 392 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 CMA1P23946 247 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ABCG1P45844 678 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 KRT85P78386 507 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 AMPD3Q01432 767 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 TWF1Q12792 350 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 GPR17Q13304 367 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 DMC1Q14565 340 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 TMEM196Q5HYL7 178 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ARMCX5Q6P1M9 558 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ARID3BQ8IVW6 561 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-201ENST00000276585 GPD1LQ8N335 351 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 KIAA0895Q8NCT3 520 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 RPLP0P6Q8NHW5 317 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 PIP4K2CQ8TBX8 421 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 PAGE5Q96GU1 130 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 CLMPQ9H6B4 373 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 AGPAT3Q9NRZ7 376 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 MBD1Q9UIS9 605 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-201ENST00000276585 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
MRPS28-201ENST00000276585 ANAPC1Q9H1A4 1944 aa13.21□□□□□ -0.3
MRPS28-201ENST00000276585 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 PVALEFA0A1B0GWK0 134 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 MTMR11A4FU01 709 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 LDHAP00338 332 aaKnown RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 ITGB3P05106 788 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 CFIP05156 583 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 FTH1P19P0C7X4 201 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 PAX3P23760 479 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 TAF6P49848 677 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 EPHA5P54756 1037 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 TFAMQ00059 246 aaKnown RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 MYBPC2Q14324 1141 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 TRIP6Q15654 476 aaKnown RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 WSCD1Q658N2 575 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 LMBRD2Q68DH5 695 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 TSTD1Q8NFU3 115 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 OR5B17Q8NGF7 314 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 PGLYRP2Q96PD5 576 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 MTMR12Q9C0I1 747 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 GOLPH3LQ9H4A5 285 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 FSCN3Q9NQT6 498 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
MRPS28-201ENST00000276585 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-201ENST00000276585 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
MRPS28-201ENST00000276585 HAX1O00165 279 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 CYB561D2O14569 222 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 CAPN9O14815 690 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 KIAA0391O15091 583 aaKnown RBP13.19□□□□□ -0.3
MRPS28-201ENST00000276585 MAP3K13O43283 966 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 NDUFA8P51970 172 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 STK4Q13043 487 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 SYT13Q7L8C5 426 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 USP37Q86T82 979 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 LRRTM3Q86VH5 581 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 TMC8Q8IU68 726 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 ACDQ96AP0 544 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
MRPS28-201ENST00000276585 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
MRPS28-201ENST00000276585 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 INTS13Q9NVM9 706 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
MRPS28-201ENST00000276585 A0A087WV48 116 aa13.18□□□□□ -0.3
MRPS28-201ENST00000276585 KPNA7A9QM74 516 aa13.18□□□□□ -0.3
MRPS28-201ENST00000276585 TRDMT1O14717 391 aaKnown RBP13.18□□□□□ -0.3
MRPS28-201ENST00000276585 CLIC2O15247 247 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms